Department of Chemistry, Indian Institute of Science Education and Research (IISER), Dr Homi Bhabha Road, Pune-411008, Maharashtra, India.
Phys Chem Chem Phys. 2014 Aug 28;16(32):17163-71. doi: 10.1039/c4cp01693a.
In this study, we have determined the structure of a medicinally important molecule saligenin (2-hydroxybenzyl alcohol) using UV, IR and microwave absorption spectroscopy in a supersonic jet combined with ab initio calculations. The structure of the only observed conformer of saligenin corresponds to the global minimum on the conformational surface. The observed structure is stabilized by an intramolecular strong O-H···O hydrogen bonding as well as a very weak O-H···π interaction. The hydrogen bond is formed through phenolic OH as the hydrogen bond donor and benzylic OH as the hydrogen bond acceptor while the O-H···π interaction is through benzylic O-H as the hydrogen bond donor and phenyl group as the hydrogen bond acceptor. It has been observed that the benzylic OH stretching frequency in saligenin is more red-shifted compared to that in benzyl alcohol as the strong O-H···O interaction present in saligenin acts on the benzylic O-H group. In fact, there is a subtle interplay among the strong O-H···O hydrogen bond, weak O-H···π interaction, and steric effects arising from the ortho substitution of the OH group in benzyl alcohol. This fine-tuning of multiple interactions very often governs the specific structures of biomolecules and materials.
在这项研究中,我们使用超声速射流结合从头计算的方法,通过紫外、红外和微波吸收光谱确定了一种具有医学重要性的分子——水杨醇(2-羟基苯甲醇)的结构。水杨醇唯一观察到的构象对应于构象表面上的全局最小值。观察到的结构通过分子内强的 O-H···O 氢键以及非常弱的 O-H···π 相互作用得到稳定。氢键通过酚羟基作为氢键供体和苄醇羟基作为氢键受体形成,而 O-H···π 相互作用则通过苄醇羟基作为氢键供体和苯基作为氢键受体形成。已经观察到,与苯甲醇相比,水杨醇中的苄醇羟基伸缩频率发生了更大的红移,因为存在于水杨醇中的强 O-H···O 相互作用作用于苄醇羟基。事实上,由于苯甲醇中 OH 基团的邻位取代,强的 O-H···O 氢键、弱的 O-H···π 相互作用和空间位阻之间存在微妙的相互作用。这种多种相互作用的精细调节常常控制着生物分子和材料的特定结构。