Shimizu Yuko, Nishitsuji Hironori, Marusawa Hiroyuki, Ujino Saneyuki, Takaku Hiroshi, Shimotohno Kunitada
Research Center for Hepatitis and Immunology, National Center for Global Health and Medicine, 1-7-1, Kohnodai, Ichikawa, Chiba 272-8516, Japan,.
Research Center for Hepatitis and Immunology, National Center for Global Health and Medicine, 1-7-1, Kohnodai, Ichikawa, Chiba 272-8516, Japan.
J Biol Chem. 2014 Sep 19;289(38):26226-26238. doi: 10.1074/jbc.M114.563221. Epub 2014 Aug 6.
Apolipoprotein B mRNA-editing enzyme, catalytic polypeptide 1 (APOBEC1) is an intestine-specific RNA-binding protein. However, inflammation or exposure to DNA-damaging agents can induce ectopic APOBEC1 expression, which can result in hepatocellular hyperplasia in animal models. To identify its RNA targets, FLAG-tagged APOBEC1 was immunoprecipitated from transfected HuH7.5 hepatocellular carcinoma cells and analyzed using DNA microarrays. The interleukin-8 (IL8) mRNA was the most abundant co-precipitated RNA. Exogenous APOBEC1 expression increased IL8 production by extending the half-life of the IL8 mRNA. A cluster of AU-rich elements in the 3'-UTR of IL8 was essential to the APOBEC1-mediated increase in IL8 production. Notably, IL8 mRNA did not co-immunoprecipitate with APOBEC1 from lysates of other cell types at appreciable levels; therefore, other factors may enhance the association between APOBEC1 and IL8 mRNA in a cell type-specific manner. A yeast two-hybrid analysis and siRNA screen were used to identify proteins that enhance the interaction between APOBEC1 and IL8 mRNA. Heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) was essential to the APOBEC1/IL8 mRNA association in HuH7.5 cells. Of the seven hnRNPQ isoforms, only hnRNPQ6 enabled APOBEC1 to bind to IL8 mRNA when overexpressed in HEK293 cells, which expressed the lowest level of endogenous hnRNPQ6 among the cell types examined. The results of a reporter assay using a luciferase gene fused to the IL8 3'-UTR were consistent with the hypothesis that hnRNPQ6 is required for APOBEC1-enhanced IL8 production. Collectively, these data indicate that hnRNPQ6 promotes the interaction of APOBEC1 with IL8 mRNA and the subsequent increase in IL8 production.
载脂蛋白B信使核糖核酸编辑酶催化多肽1(APOBEC1)是一种肠道特异性RNA结合蛋白。然而,炎症或接触DNA损伤剂可诱导APOBEC1异位表达,这在动物模型中可导致肝细胞增生。为了确定其RNA靶点,从转染的HuH7.5肝癌细胞中免疫沉淀带FLAG标签的APOBEC1,并使用DNA微阵列进行分析。白细胞介素8(IL8)信使核糖核酸是共沉淀RNA中含量最丰富的。外源性APOBEC1表达通过延长IL8信使核糖核酸的半衰期增加了IL8的产生。IL8 3'-非翻译区的一组富含AU的元件对于APOBEC1介导的IL8产生增加至关重要。值得注意的是,在其他细胞类型的裂解物中,IL8信使核糖核酸与APOBEC1没有明显水平的共免疫沉淀;因此,其他因素可能以细胞类型特异性方式增强APOBEC1与IL8信使核糖核酸之间的关联。使用酵母双杂交分析和小干扰RNA筛选来鉴定增强APOBEC1与IL8信使核糖核酸之间相互作用的蛋白质。异质性核核糖核蛋白Q(hnRNPQ)对于HuH7.5细胞中APOBEC1/IL8信使核糖核酸的关联至关重要。在七种hnRNPQ同工型中,只有hnRNPQ6在HEK293细胞中过表达时能使APOBEC1结合到IL8信使核糖核酸上,在检测的细胞类型中,HEK293细胞内源性hnRNPQ6表达水平最低。使用与IL8 3'-非翻译区融合的荧光素酶基因进行报告基因检测的结果与hnRNPQ6是APOBEC1增强IL8产生所必需的这一假设一致。总体而言,这些数据表明hnRNPQ6促进APOBEC1与IL8信使核糖核酸的相互作用以及随后IL8产生的增加。