Chen Chao-Ju, Wu Tsu-Lan, Lu Po-Liang, Chen Ying-Tsong, Fung Chang-Phone, Chuang Yin-Ching, Lin Jung-Chung, Siu L Kristopher
Department of Internal Medicine, Kaohsiung Medical University Hospital, Kaohsiung, Taiwan; College of Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan.
Department of Clinical Pathology, Linkou Chang Gung Memorial Hospital, Taoyuan, Taiwan.
PLoS One. 2014 Aug 21;9(8):e104899. doi: 10.1371/journal.pone.0104899. eCollection 2014.
Two plasmids carrying blaNDM-1 isolated from carbapenem-resistant Klebsiella pneumoniae (CR-KP) and carbapenem-resistant Escherichia coli (CR-EC) were sequenced. CR-KP and CR-EC were isolated from two Taiwanese patients without travel histories.
Complete sequencing of the plasmids (pLK75 and pLK78) was conducted using a shotgun approach. Annotation of the contigs was performed using the RAST Server, followed by manual inspection and correction.
These similar plasmids were obtained from two patients with overlapping stays at the same hospital. The pLK75 and pLK78 plasmids were 56,489-bp and 56,072-bp in length, respectively. Plasmid annotation revealed a common backbone similar to the IncN plasmid pR46. The regions flanking the blaNDM-1 genes in these plasmids were very similar to plasmid pNDM-HU01 in Japan, which contains a complex class 1 integron located next to an ISCR1 element. The ISCR1 element has been suggested to provide a powerful mechanism for mobilising antibiotic resistance genes.
Two indigenous NDM-1-producing Enterobacteriaceae cases were identified for the first time in Taiwan, highlighting the alarming introduction of NDM-1-producing Enterobacteriaceae in this region.
对从耐碳青霉烯类肺炎克雷伯菌(CR-KP)和耐碳青霉烯类大肠埃希菌(CR-EC)中分离出的携带blaNDM-1的两种质粒进行测序。CR-KP和CR-EC分离自两名无旅行史的台湾患者。
采用鸟枪法对质粒(pLK75和pLK78)进行全测序。使用RAST服务器对重叠群进行注释,随后进行人工检查和校正。
这些相似的质粒来自在同一家医院有重叠住院时间的两名患者。pLK75和pLK78质粒的长度分别为56,489碱基对和56,072碱基对。质粒注释显示出与IncN质粒pR46相似的共同主干。这些质粒中blaNDM-1基因侧翼区域与日本的质粒pNDM-HU01非常相似,pNDM-HU01含有一个位于ISCR1元件旁边的复杂1类整合子。ISCR1元件被认为提供了一种强大的机制来移动抗生素抗性基因。
台湾首次鉴定出两例本土产NDM-1的肠杆菌科病例,凸显了该地区产NDM-1肠杆菌科的惊人引入。