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解析血卟啉与牛血清白蛋白的结合模式。

Deciphering the binding modes of hematoporphyrin to bovine serum albumin.

作者信息

Ahmed Mohammed, Guleria Apurav, Singh Ajay K, Bandyopadhyay Tusar, Sarkar Sisir K

出版信息

Indian J Biochem Biophys. 2014 Jun;51(3):175-87.

Abstract

Interaction of proteins with small molecules is important in understanding delivery and transport of different therapeutic agents, including drugs. In the present study, we investigated the interaction between hematoporphyrin (HP), the principal component of photosensitizing drug with bovine serum albumin (BSA) in aqueous buffer solution using UV-Vis absorption spectroscopy and fluorescence measurements. The results were further substantiated by molecular docking and molecular dynamics (MD) simulation. Our results revealed that fluorescence of BSA was dominantly quenched by the ground-state complex formation with HP accompanied by the electronic energy transfer (EET) to the later. We experimentally determined the thermodynamic parameters such as deltaG0, deltaH0, and deltaS0 for the HP-BSA system which were -35.5 kJ mole(-1), -56.4 kJ mole(-1) and -0.06 kJ mole(-1) K(-1), respectively. These parameters suggested hydrogen-bonding and Van der Waals forces playing major role in the complexation. This was also supported by the binding energy parameters calculated by molecular docking. Moreover, the experimentally determined deltaG0 nicely correlated with those determined by molecular docking and MD-simulation. Further, computational results clearly showed that the binding of HP with BSA in the subdomains IB and IIA.

摘要

蛋白质与小分子之间的相互作用对于理解包括药物在内的不同治疗剂的递送和运输至关重要。在本研究中,我们使用紫外可见吸收光谱和荧光测量方法,研究了光敏药物的主要成分血卟啉(HP)与牛血清白蛋白(BSA)在水性缓冲溶液中的相互作用。分子对接和分子动力学(MD)模拟进一步证实了结果。我们的结果表明,BSA的荧光主要通过与HP形成基态复合物而猝灭,并伴随着向后者的电子能量转移(EET)。我们通过实验确定了HP-BSA系统的热力学参数,如ΔG0、ΔH0和ΔS0,分别为-35.5 kJ·mol⁻¹、-56.4 kJ·mol⁻¹和-0.06 kJ·mol⁻¹·K⁻¹。这些参数表明氢键和范德华力在络合过程中起主要作用。分子对接计算的结合能参数也支持了这一点。此外,实验测定的ΔG0与分子对接和MD模拟测定的结果很好地相关。此外,计算结果清楚地表明HP与BSA在亚结构域IB和IIA中的结合。

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