Wolk Omri, Agbaria Riad, Dahan Arik
Department of Clinical Pharmacology, School of Pharmacy, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Drug Des Devel Ther. 2014 Sep 24;8:1563-75. doi: 10.2147/DDDT.S68909. eCollection 2014.
The main objective of this work was to investigate in-silico predictions of physicochemical properties, in order to guide oral drug development by provisional biopharmaceutics classification system (BCS). Four in-silico methods were used to estimate LogP: group contribution (CLogP) using two different software programs, atom contribution (ALogP), and element contribution (KLogP). The correlations (r(2)) of CLogP, ALogP and KLogP versus measured LogP data were 0.97, 0.82, and 0.71, respectively. The classification of drugs with reported intestinal permeability in humans was correct for 64.3%-72.4% of the 29 drugs on the dataset, and for 81.82%-90.91% of the 22 drugs that are passively absorbed using the different in-silico algorithms. Similar permeability classification was obtained with the various in-silico methods. The in-silico calculations, along with experimental melting points, were then incorporated into a thermodynamic equation for solubility estimations that largely matched the reference solubility values. It was revealed that the effect of melting point on the solubility is minor compared to the partition coefficient, and an average melting point (162.7 °C) could replace the experimental values, with similar results. The in-silico methods classified 20.76% (± 3.07%) as Class 1, 41.51% (± 3.32%) as Class 2, 30.49% (± 4.47%) as Class 3, and 6.27% (± 4.39%) as Class 4. In conclusion, in-silico methods can be used for BCS classification of drugs in early development, from merely their molecular formula and without foreknowledge of their chemical structure, which will allow for the improved selection, engineering, and developability of candidates. These in-silico methods could enhance success rates, reduce costs, and accelerate oral drug products development.
这项工作的主要目的是研究物理化学性质的计算机模拟预测,以便通过临时生物药剂学分类系统(BCS)指导口服药物开发。使用了四种计算机模拟方法来估算LogP:使用两个不同软件程序的基团贡献法(CLogP)、原子贡献法(ALogP)和元素贡献法(KLogP)。CLogP、ALogP和KLogP与实测LogP数据的相关性(r²)分别为0.97、0.82和0.71。对于数据集中的29种药物,根据所报道的人体肠道通透性进行的药物分类,正确度为64.3%-72.4%;对于22种被动吸收的药物,使用不同的计算机模拟算法进行分类的正确度为81.82%-90.91%。使用各种计算机模拟方法获得了相似的通透性分类结果。然后,将计算机模拟计算结果与实验熔点一起纳入一个溶解度估算的热力学方程,该方程与参考溶解度值基本相符。结果表明,与分配系数相比,熔点对溶解度的影响较小,平均熔点(162.7℃)可以替代实验值,结果相似。计算机模拟方法将20.76%(±3.07%)分类为1类,41.51%(±3.32%)分类为2类,30.49%(±4.47%)分类为3类,6.27%(±4.39%)分类为4类。总之,计算机模拟方法可用于药物早期开发阶段的BCS分类,仅根据其分子式,无需预先了解其化学结构,这将有助于改进候选药物的选择、设计和可开发性。这些计算机模拟方法可以提高成功率、降低成本并加速口服药物产品的开发。