• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

串联质谱法对核酸的特性分析——第二个十年(2004-2013):从 DNA 到 RNA 及修饰序列。

Characterization of nucleic acids by tandem mass spectrometry - The second decade (2004-2013): From DNA to RNA and modified sequences.

机构信息

Department of Chemistry and Biochemistry, University of Bern, CH-3012, Bern, Switzerland.

出版信息

Mass Spectrom Rev. 2016 Jul;35(4):483-523. doi: 10.1002/mas.21442. Epub 2014 Oct 6.

DOI:10.1002/mas.21442
PMID:25288464
Abstract

Nucleic acids play key roles in the storage and processing of genetic information, as well as in the regulation of cellular processes. Consequently, they represent attractive targets for drugs against gene-related diseases. On the other hand, synthetic oligonucleotide analogues have found application as chemotherapeutic agents targeting cellular DNA and RNA. The development of effective nucleic acid-based chemotherapeutic strategies requires adequate analytical techniques capable of providing detailed information about the nucleotide sequences, the presence of structural modifications, the formation of higher-order structures, as well as the interaction of nucleic acids with other cellular components and chemotherapeutic agents. Due to the impressive technical and methodological developments of the past years, tandem mass spectrometry has evolved to one of the most powerful tools supporting research related to nucleic acids. This review covers the literature of the past decade devoted to the tandem mass spectrometric investigation of nucleic acids, with the main focus on the fundamental mechanistic aspects governing the gas-phase dissociation of DNA, RNA, modified oligonucleotide analogues, and their adducts with metal ions. Additionally, recent findings on the elucidation of nucleic acid higher-order structures by tandem mass spectrometry are reviewed. © 2014 Wiley Periodicals, Inc., Mass Spec Rev 35:483-523, 2016.

摘要

核酸在遗传信息的存储和处理以及细胞过程的调节中起着关键作用。因此,它们是针对与基因相关疾病的药物的有吸引力的靶标。另一方面,合成寡核苷酸类似物已被用作针对细胞 DNA 和 RNA 的化学治疗剂。有效的基于核酸的化学治疗策略的发展需要适当的分析技术,这些技术能够提供有关核苷酸序列、结构修饰的存在、高级结构的形成以及核酸与其他细胞成分和化学治疗剂的相互作用的详细信息。由于过去几年令人印象深刻的技术和方法学发展,串联质谱已发展成为支持与核酸相关研究的最强大工具之一。本综述涵盖了过去十年中致力于串联质谱研究核酸的文献,主要重点是控制 DNA、RNA、修饰的寡核苷酸类似物及其与金属离子的加合物在气相中解离的基本机理方面。此外,还回顾了通过串联质谱阐明核酸高级结构的最新发现。©2014 年 Wiley 期刊,Inc.,质谱评论 35:483-523,2016 年。

相似文献

1
Characterization of nucleic acids by tandem mass spectrometry - The second decade (2004-2013): From DNA to RNA and modified sequences.串联质谱法对核酸的特性分析——第二个十年(2004-2013):从 DNA 到 RNA 及修饰序列。
Mass Spectrom Rev. 2016 Jul;35(4):483-523. doi: 10.1002/mas.21442. Epub 2014 Oct 6.
2
Elucidation of nucleic acid-drug interactions by tandem mass spectrometry.
Chimia (Aarau). 2014;68(3):164-7. doi: 10.2533/chimia.2014.164.
3
Transition Metal-based Anticancer Drugs Targeting Nucleic Acids: A Tandem Mass Spectrometric Investigation.靶向核酸的过渡金属基抗癌药物:串联质谱研究
Chimia (Aarau). 2017 Mar 29;71(3):120-123. doi: 10.2533/chimia.2017.120.
4
Mass spectrometry of oligonucleotides.寡核苷酸的质谱分析。
Nucleosides Nucleotides Nucleic Acids. 2007;26(10-12):1629-33. doi: 10.1080/15257770701549053.
5
Metal ion-catalyzed nucleic acid alkylation and fragmentation.金属离子催化的核酸烷基化和片段化。
J Am Chem Soc. 2002 Jul 10;124(27):7950-62. doi: 10.1021/ja017746x.
6
Frontiers of mass spectrometry in nucleic acids analysis.核酸分析中质谱技术的前沿领域
Eur J Mass Spectrom (Chichester). 2010;16(3):351-65. doi: 10.1255/ejms.1045.
7
OMA and OPA--software-supported mass spectra analysis of native and modified nucleic acids.OMA 和 OPA——用于天然和修饰核酸的软件支持的质谱分析。
J Am Soc Mass Spectrom. 2013 Feb;24(2):249-56. doi: 10.1007/s13361-012-0529-1. Epub 2012 Dec 21.
8
Investigation of the Influence of Charge State and Collision Energy on Oligonucleotide Fragmentation by Tandem Mass Spectrometry.采用串联质谱法研究电荷状态和碰撞能对寡核苷酸片段化的影响。
Molecules. 2023 Jan 25;28(3):1169. doi: 10.3390/molecules28031169.
9
Tandem mass spectrometry for characterization of covalent adducts of DNA with anticancer therapeutics.采用串联质谱法对与抗癌治疗药物发生共价结合的 DNA 进行特征分析。
Mass Spectrom Rev. 2013 Jul-Aug;32(4):247-66. doi: 10.1002/mas.21363. Epub 2012 Nov 13.
10
The influence of Cisplatin on the gas-phase dissociation of oligonucleotides studied by electrospray ionization tandem mass spectrometry.顺铂对通过电喷雾电离串联质谱法研究的寡核苷酸气相解离的影响。
J Am Soc Mass Spectrom. 2009 May;20(5):792-804. doi: 10.1016/j.jasms.2008.12.018. Epub 2008 Dec 31.

引用本文的文献

1
The intrinsic preference of guanosine bases for cleavage-facilitating interactions with phosphodiester moieties in RNA anions revealed by base modifications and mass spectrometry.碱基修饰和质谱揭示鸟苷碱基与RNA阴离子中磷酸二酯部分发生促进切割相互作用的内在偏好。
Nucleic Acids Res. 2025 Jun 6;53(11). doi: 10.1093/nar/gkaf494.
2
Top-Down Characterization of Yeast tRNA by Gas-Phase Fractionation and Collisionally Activated Dissociation Informed by Electron Photodetachment Charge Reduction Mass Spectrometry.通过气相分级分离和电子光致脱附电荷减少质谱法辅助的碰撞激活解离对酵母tRNA进行自上而下的表征。
Anal Chem. 2025 Jun 24;97(24):12746-12754. doi: 10.1021/acs.analchem.5c01561. Epub 2025 Jun 9.
3
Progress in Tandem Mass Spectrometry Data Analysis for Nucleic Acids.
核酸串联质谱数据分析的进展
Mass Spectrom Rev. 2025 Jan 10. doi: 10.1002/mas.21923.
4
Nucleo-SAFARI: Automated Identification of Fragment Ions in Top-Down MS/MS Spectra of Nucleic Acids.Nucleo-SAFARI:用于在核酸的自上而下 MS/MS 谱中自动识别片段离子的方法。
Anal Chem. 2024 Oct 15;96(41):16115-16120. doi: 10.1021/acs.analchem.4c03201. Epub 2024 Oct 4.
5
Sequencing of Phosphorodiamidate Morpholino Oligomers by Hydrophilic Interaction Chromatography Coupled to Tandem Mass Spectrometry.通过亲水相互作用色谱-串联质谱联用对磷酰胺吗啉代寡聚物进行测序
J Am Soc Mass Spectrom. 2024 Oct 2;35(10):2490-2498. doi: 10.1021/jasms.4c00281. Epub 2024 Aug 30.
6
Comprehensive Overview of Bottom-Up Proteomics Using Mass Spectrometry.基于质谱的自下而上蛋白质组学综合概述
ACS Meas Sci Au. 2024 Jun 4;4(4):338-417. doi: 10.1021/acsmeasuresciau.3c00068. eCollection 2024 Aug 21.
7
MIND4OLIGOS: Determining the Monoisotopic Mass of Oligonucleotides Observed in High-Resolution Mass Spectrometry.MIND4OLIGOS:在高分辨率质谱中确定寡核苷酸的单同位素质量。
Anal Chem. 2024 Jun 11;96(23):9343-9352. doi: 10.1021/acs.analchem.3c04351. Epub 2024 May 28.
8
Phosphorothioate RNA Analysis by NETD Tandem Mass Spectrometry.通过 NETD 串联质谱法分析硫代磷酸酯 RNA。
Mol Cell Proteomics. 2024 Apr;23(4):100742. doi: 10.1016/j.mcpro.2024.100742. Epub 2024 Feb 23.
9
A High-Throughput Workflow for Mass Spectrometry Analysis of Nucleic Acids by Nanoflow Desalting.一种用于通过纳流脱盐对核酸进行质谱分析的高通量工作流程。
Anal Chem. 2024 Feb 8. doi: 10.1021/acs.analchem.3c05428.
10
Comprehensive Overview of Bottom-Up Proteomics using Mass Spectrometry.基于质谱的自下而上蛋白质组学综合概述
ArXiv. 2023 Nov 13:arXiv:2311.07791v1.