Carrazana-García Jorge A, Cabaleiro-Lago Enrique M, Campo-Cacharrón Alba, Rodríguez-Otero Jesús
Departamento de Química Física, Facultade de Ciencias, Universidade de Santiago de Compostela, Campus de Lugo, Avenida Alfonso X El Sabio s/n, Lugo 27002, Lugo, Spain.
Org Biomol Chem. 2014 Dec 7;12(45):9145-56. doi: 10.1039/c4ob01879f.
The simultaneous interactions of an anion and a cation with a π system were investigated by MP2 and M06-2X theoretical calculations. Indole was chosen as a model π system for its relevance in biological environments. Two different orientations of the anion, interacting with the N-H and with the C-H groups of indole, were considered. The four cations (Na(+), NH4(+), C(NH2)3(+) and N(CH3)4(+)) and the four anions (Cl(-), NO3(-), HCOO(-) and BF4(-)) included in the study are of biological interest. The total interaction energy of the ternary complexes was calculated and separated into its two- and three-body components and all of them are further divided into their electrostatic, exchange, repulsion, polarization and dispersion contributions using the local molecular orbital-energy decomposition analysis (LMO-EDA) methodology. The binding energy of the indole-cation-anion complexes depends on both ions, with the cation having the strongest effect. The intense cation-anion attraction determines the geometric and energetic features in all ternary complexes. These structures, with both ions on the same side of the π system, show an anti-cooperative interaction. However, the interaction is not only determined by electrostatics, but also the polarization contribution is important. Specific interactions like the one established between the anion and the N-H group of indole or the proton transfer between an acidic cation and a basic anion play a significant role in the energetics and the structure of particular complexes. The presence of the polar solvent as modelled with the polarizable continuum model (PCM) does not seem to have a significant effect on the geometry of the ternary complexes, but drastically weakens the interaction energy. Also, the strength of the interaction is reduced at a faster rate when the anion is pushed away, compared to the results obtained in the gas phase. The combination of PCM with the addition of one water molecule indicates that the PCM method properly reproduces the main energetic and geometrical changes, even at the quantitative level, but the explicit hydration allows refining the solvent effect and detecting cases that do not follow the general trend.
通过MP2和M06 - 2X理论计算研究了阴离子和阳离子与π体系的同时相互作用。由于吲哚在生物环境中的相关性,选择其作为模型π体系。考虑了阴离子与吲哚的N - H和C - H基团相互作用的两种不同取向。研究中包含的四种阳离子(Na⁺、NH₄⁺、C(NH₂)₃⁺和N(CH₃)₄⁺)和四种阴离子(Cl⁻、NO₃⁻、HCOO⁻和BF₄⁻)具有生物学意义。计算了三元配合物的总相互作用能,并将其分离为二体和三体分量,使用局域分子轨道 - 能量分解分析(LMO - EDA)方法将所有这些分量进一步划分为静电、交换、排斥、极化和色散贡献。吲哚 - 阳离子 - 阴离子配合物的结合能取决于两种离子,其中阳离子的影响最强。强烈的阳离子 - 阴离子吸引力决定了所有三元配合物的几何和能量特征。这些结构中,两种离子位于π体系的同一侧,表现出反协同相互作用。然而,这种相互作用不仅由静电作用决定,极化贡献也很重要。特定相互作用,如阴离子与吲哚的N - H基团之间建立的相互作用或酸性阳离子与碱性阴离子之间的质子转移,在特定配合物的能量和结构中起重要作用。用可极化连续介质模型(PCM)模拟的极性溶剂的存在似乎对三元配合物的几何结构没有显著影响,但会大幅削弱相互作用能。此外,与气相结果相比,当阴离子被推开时,相互作用强度下降得更快。PCM与添加一个水分子的组合表明,PCM方法即使在定量水平上也能正确再现主要的能量和几何变化,但明确的水合作用允许细化溶剂效应并检测不符合一般趋势的情况。