Ou Jinli, Xie Li, Li Xiang, Zhu Dajiang, Terry Douglas P, Puente A Nicholas, Jiang Rongxin, Chen Yaowu, Wang Lihong, Shen Dinggang, Zhang Jing, Miller L Stephen, Liu Tianming
School of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou, China.
Cortical Architecture Imaging and Discovery Lab, Department of Computer Science and Bioimaging Research Center, The University of Georgia, Athens, GA, USA.
Brain Imaging Behav. 2015 Dec;9(4):663-77. doi: 10.1007/s11682-014-9320-1.
In recent years, functional connectomics signatures have been shown to be a very valuable tool in characterizing and differentiating brain disorders from normal controls. However, if the functional connectivity alterations in a brain disease are localized within sub-networks of a connectome, then accurate identification of such disease-specific sub-networks is critical and this capability entails both fine-granularity definition of connectome nodes and effective clustering of connectome nodes into disease-specific and non-disease-specific sub-networks. In this work, we adopted the recently developed DICCCOL (dense individualized and common connectivity-based cortical landmarks) system as a fine-granularity high-resolution connectome construction method to deal with the first issue, and employed an effective variant of non-negative matrix factorization (NMF) method to pinpoint disease-specific sub-networks, which we called atomic connectomics signatures in this work. We have implemented and applied this novel framework to two mild cognitive impairment (MCI) datasets from two different research centers, and our experimental results demonstrated that the derived atomic connectomics signatures can effectively characterize and differentiate MCI patients from their normal controls. In general, our work contributed a novel computational framework for deriving descriptive and distinctive atomic connectomics signatures in brain disorders.
近年来,功能连接组学特征已被证明是一种非常有价值的工具,可用于表征脑疾病并将其与正常对照区分开来。然而,如果脑疾病中的功能连接改变局限于连接组的子网内,那么准确识别此类疾病特异性子网至关重要,而这种能力既需要对连接组节点进行精细粒度的定义,也需要将连接组节点有效地聚类为疾病特异性和非疾病特异性子网。在这项工作中,我们采用了最近开发的DICCCOL(基于密集个体化和共同连接的皮质地标)系统作为一种精细粒度的高分辨率连接组构建方法来处理第一个问题,并采用非负矩阵分解(NMF)方法的一种有效变体来确定疾病特异性子网,在这项工作中我们将其称为原子连接组学特征。我们已经实现了这个新颖的框架并将其应用于来自两个不同研究中心的两个轻度认知障碍(MCI)数据集,我们的实验结果表明,所推导的原子连接组学特征能够有效地表征MCI患者并将其与正常对照区分开来。总的来说,我们的工作为推导脑疾病中描述性和独特的原子连接组学特征贡献了一个新颖的计算框架。