Lei Kun, Liu Ruizhi, An Li-Hui, Luo Ying-Feng, LeBlanc Gerald A
State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environment Sciences, No. 8, Da-Yang-Fang, An-Wai-Bei-Yuan Rd., Chao-yang District, Beijing, 100012, China.
Ecotoxicology. 2015 Mar;24(2):330-8. doi: 10.1007/s10646-014-1381-9. Epub 2014 Nov 15.
We evaluated the transcriptome dynamics of the freshwater river snail Bellamya aeruginosa exposed to 17β-estradiol (E2) using the Roche/454 GS-FLX platform. In total, 41,869 unigenes, with an average length of 586 bp, representing 36,181 contigs and 5,688 singlets were obtained. Among them, 18.08, 36.85, and 25.47 % matched sequences in the GenBank non-redundant nucleic acid database, non-redundant protein database, and Swiss protein database, respectively. Annotation of the unigenes with gene ontology, and then mapping them to biological pathways, revealed large groups of genes related to growth, development, reproduction, signal transduction, and defense mechanisms. Significant differences were found in gene expression in both liver and testicular tissues between control and E2-exposed organisms. These changes in gene expression will help in understanding the molecular mechanisms of the response to physiological stress in the river snail exposed to estrogen, and will facilitate research into biological processes and underlying physiological adaptations to xenoestrogen exposure in gastropods.
我们使用罗氏/454 GS-FLX平台评估了暴露于17β-雌二醇(E2)的淡水河螺铜锈环棱螺的转录组动态变化。总共获得了41,869个单基因,平均长度为586 bp,代表36,181个重叠群和5,688个单拷贝序列。其中,分别有18.08%、36.85%和25.47%的序列与GenBank非冗余核酸数据库、非冗余蛋白质数据库和瑞士蛋白质数据库中的序列匹配。对单基因进行基因本体注释,然后将它们映射到生物途径,发现了大量与生长、发育、繁殖、信号转导和防御机制相关的基因。在对照和E2暴露生物体的肝脏和睾丸组织中,基因表达均存在显著差异。这些基因表达的变化将有助于理解河螺暴露于雌激素时对生理应激反应的分子机制,并将促进对腹足类动物对异雌激素暴露的生物过程和潜在生理适应的研究。