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一种酶——马肌肉酰基磷酸酶的1H-NMR谱的序列特异性归属。

The sequence-specific assignment of the 1H-NMR spectrum of an enzyme, horse-muscle acylphosphatase.

作者信息

Saudek V, Boyd J, Williams R J, Stefani M, Ramponi G

机构信息

Inorganic Chemistry Laboratory, University of Oxford, England.

出版信息

Eur J Biochem. 1989 Jun 1;182(1):85-93. doi: 10.1111/j.1432-1033.1989.tb14803.x.

Abstract

A complete range of two-dimensional NMR experiments was used for the assignment of the 1H-NMR spectrum of horse muscle acylphosphatase. Firstly the spin systems of some easily identifiable amino acid side chains were assigned. These side chains involved all the aromatic residues and all the leucine, valine, isoleucine, threonine, alanine, proline as well as some of the glycine residues. Analysis of nuclear Overhauser enhancement spectra in our previous work had identified the sequential and long-range patterns characteristics for secondary structure elements. This result had also provided the identification of the main-chain alpha and amide proton resonances. Several of the completely assigned spin systems were then identified as being part of the secondary structure units which led, after analysis of the primary amino acid sequence, to unambiguous sequence-specific assignments. The identification and assignment of the remaining side-chain resonances was then completed and are reported here. These results provide a complete data base for the three-dimensional structure determination of this enzyme in solution.

摘要

一系列完整的二维核磁共振实验被用于确定马肌肉酰基磷酸酶的1H-NMR谱。首先,确定了一些易于识别的氨基酸侧链的自旋系统。这些侧链涉及所有芳香族残基以及所有的亮氨酸、缬氨酸、异亮氨酸、苏氨酸、丙氨酸、脯氨酸以及一些甘氨酸残基。在我们之前的工作中,对核Overhauser增强谱的分析确定了二级结构元件的序列和远程模式特征。该结果还提供了主链α质子和酰胺质子共振的识别。然后,确定了几个完全确定的自旋系统是二级结构单元的一部分,在对一级氨基酸序列进行分析后,得到了明确的序列特异性归属。然后完成了其余侧链共振的识别和归属,并在此报告。这些结果为该酶在溶液中的三维结构测定提供了完整的数据库。

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