Zaneveld Jacques, Siddiqui Sorath, Li Huajin, Wang Xia, Wang Hui, Wang Keqing, Li Hui, Ren Huanan, Lopez Irma, Dorfman Allison, Khan Ayesha, Wang Feng, Salvo Jason, Gelowani Violet, Li Yumei, Sui Ruifang, Koenekoop Robert, Chen Rui
1] Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA [2] Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
McGill Ocular Genetics Laboratory, Montreal Children's Hospital, Departments of Paediatric Surgery, Human Genetics and Ophthalmology, McGill University Health Centre, Montreal, Quebec, Canada.
Genet Med. 2015 Apr;17(4):262-70. doi: 10.1038/gim.2014.174. Epub 2014 Dec 4.
Stargardt macular dystrophy (STGD) results in early central vision loss. We sought to explain the genetic cause of STGD in a cohort of 88 patients from three different cultural backgrounds.
Next-generation sequencing using a novel capture panel was used to search for disease-causing mutations. Patients with undetermined causes were clinically reexamined and tested for copy-number variations as well as intronic mutations.
We determined the cause of disease in 67% of our patients. Our analysis identified 35 novel ABCA4 alleles. Eleven patients had mutations in genes not previously reported to cause STGD. Finally, 45% of our patients with unsolved causes had single deleterious mutations in ABCA4, a recessive disease gene. No likely pathogenic copy-number variations were identified.
This study expands our knowledge of STGD by identifying dozens of novel alleles that cause the disease. The frequency of single mutations in ABCA4 among STGD patients is higher than that among controls, indicating that these mutations contribute to disease. Disease in 11 patients was explained by mutations outside ABCA4, underlining the need to genotype all retinal disease genes to maximize genetic diagnostic rates. Few ABCA4 mutations were observed in our French Canadian patients. This population may contain an unidentified founder mutation. Our results indicate that copy-number variations are unlikely to be a major cause of STGD.
斯塔加特黄斑营养不良(STGD)会导致早期中心视力丧失。我们试图在来自三种不同文化背景的88名患者队列中解释STGD的遗传病因。
使用一种新型捕获芯片进行二代测序,以寻找致病突变。对病因未明的患者进行临床复查,并检测拷贝数变异以及内含子突变。
我们确定了67%患者的病因。我们的分析鉴定出35个新的ABCA4等位基因。11名患者的致病基因以前未报道过会导致STGD。最后,45%病因未明的患者在隐性疾病基因ABCA4中存在单个有害突变。未发现可能致病的拷贝数变异。
本研究通过鉴定数十个导致该疾病的新等位基因,扩展了我们对STGD的认识。STGD患者中ABCA4单突变的频率高于对照组,表明这些突变会导致疾病。11名患者的疾病是由ABCA4以外的突变所解释的,这凸显了对所有视网膜疾病基因进行基因分型以最大化遗传诊断率的必要性。在我们的法裔加拿大患者中观察到很少的ABCA4突变。该人群可能存在一个未被识别的奠基者突变。我们的结果表明,拷贝数变异不太可能是STGD的主要病因。