Golden Emily, Karton Amir, Vrielink Alice
School of Chemistry and Biochemistry, University of Western Australia, Crawley, Western Australia 6009, Australia.
Acta Crystallogr D Biol Crystallogr. 2014 Dec 1;70(Pt 12):3155-66. doi: 10.1107/S139900471402286X. Epub 2014 Nov 22.
Cholesterol oxidase (CO) is a flavoenzyme that catalyzes the oxidation and isomerization of cholesterol to cholest-4-en-3-one. The reductive half reaction occurs via a hydride transfer from the substrate to the FAD cofactor. The structures of CO reduced with dithionite under aerobic conditions and in the presence of the substrate 2-propanol under both aerobic and anaerobic conditions are presented. The 1.32 Å resolution structure of the dithionite-reduced enzyme reveals a sulfite molecule covalently bound to the FAD cofactor. The isoalloxazine ring system displays a bent structure relative to that of the oxidized enzyme, and alternate conformations of a triad of aromatic residues near to the cofactor are evident. A 1.12 Å resolution anaerobically trapped reduced enzyme structure in the presence of 2-propanol does not show a similar bending of the flavin ring system, but does show alternate conformations of the aromatic triad. Additionally, a significant difference electron-density peak is observed within a covalent-bond distance of N5 of the flavin moiety, suggesting that a hydride-transfer event has occurred as a result of substrate oxidation trapping the flavin in the electron-rich reduced state. The hydride transfer generates a tetrahedral geometry about the flavin N5 atom. High-level density-functional theory calculations were performed to correlate the crystallographic findings with the energetics of this unusual arrangement of the flavin moiety. These calculations suggest that strong hydrogen-bond interactions between Gly120 and the flavin N5 centre may play an important role in these structural features.
胆固醇氧化酶(CO)是一种黄素酶,可催化胆固醇氧化并异构化为胆甾 - 4 - 烯 - 3 - 酮。还原半反应通过氢化物从底物转移至FAD辅因子发生。本文展示了在有氧条件下用连二亚硫酸盐还原的CO结构,以及在有氧和无氧条件下存在底物2 - 丙醇时的CO结构。连二亚硫酸盐还原酶的1.32 Å分辨率结构显示一个亚硫酸盐分子与FAD辅因子共价结合。异咯嗪环系统相对于氧化酶呈现出弯曲结构,并且在辅因子附近的一组芳香族残基存在交替构象。在2 - 丙醇存在下,无氧捕获的还原酶1.12 Å分辨率结构未显示黄素环系统有类似弯曲,但确实显示了芳香族三联体的交替构象。此外,在黄素部分N5的共价键距离内观察到一个显著的差分电子密度峰,这表明由于底物氧化将黄素捕获在富电子的还原状态,发生了氢化物转移事件。氢化物转移在黄素N5原子周围产生了四面体几何结构。进行了高水平的密度泛函理论计算,以将晶体学研究结果与黄素部分这种不寻常排列的能量学相关联。这些计算表明,Gly120与黄素N5中心之间的强氢键相互作用可能在这些结构特征中起重要作用。