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条件性 piggyBac 转座系统用于小鼠遗传筛选,鉴定胰腺癌中的致癌网络。

A conditional piggyBac transposition system for genetic screening in mice identifies oncogenic networks in pancreatic cancer.

机构信息

1] Department of Medicine II, Klinikum Rechts der Isar, Technische Universität München, München, Germany. [2] German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany. [3] The Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridgeshire, UK.

The Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridgeshire, UK.

出版信息

Nat Genet. 2015 Jan;47(1):47-56. doi: 10.1038/ng.3164. Epub 2014 Dec 8.

Abstract

Here we describe a conditional piggyBac transposition system in mice and report the discovery of large sets of new cancer genes through a pancreatic insertional mutagenesis screen. We identify Foxp1 as an oncogenic transcription factor that drives pancreatic cancer invasion and spread in a mouse model and correlates with lymph node metastasis in human patients with pancreatic cancer. The propensity of piggyBac for open chromatin also enabled genome-wide screening for cancer-relevant noncoding DNA, which pinpointed a Cdkn2a cis-regulatory region. Histologically, we observed different tumor subentities and discovered associated genetic events, including Fign insertions in hepatoid pancreatic cancer. Our studies demonstrate the power of genetic screening to discover cancer drivers that are difficult to identify by other approaches to cancer genome analysis, such as downstream targets of commonly mutated human cancer genes. These piggyBac resources are universally applicable in any tissue context and provide unique experimental access to the genetic complexity of cancer.

摘要

在这里,我们描述了一个条件性的 piggyBac 转座系统在小鼠中,并报告了通过胰腺插入诱变筛选发现的大量新的癌症基因。我们发现 Foxp1 是一种致癌转录因子,它驱动小鼠模型中的胰腺癌细胞侵袭和扩散,并与人类胰腺癌患者的淋巴结转移相关。piggyBac 对开放染色质的倾向也使全基因组范围内筛选与癌症相关的非编码 DNA 成为可能,从而确定了一个 Cdkn2a 顺式调控区。组织学上,我们观察到不同的肿瘤亚单位,并发现了相关的遗传事件,包括肝样胰腺癌细胞中的 Fign 插入。我们的研究表明,遗传筛选具有发现癌症驱动因子的强大功能,这些驱动因子很难通过其他癌症基因组分析方法来识别,例如常见突变的人类癌症基因的下游靶点。这些 piggyBac 资源在任何组织背景下都普遍适用,并为癌症遗传复杂性提供了独特的实验途径。

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