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弯曲乳杆菌运动性的检测与基因组特征分析:唾液乳杆菌进化枝外一个物种运动性的确认

Detection and genomic characterization of motility in Lactobacillus curvatus: confirmation of motility in a species outside the Lactobacillus salivarius clade.

作者信息

Cousin Fabien J, Lynch Shónagh M, Harris Hugh M B, McCann Angela, Lynch Denise B, Neville B Anne, Irisawa Tomohiro, Okada Sanae, Endo Akihito, O'Toole Paul W

出版信息

Appl Environ Microbiol. 2015 Feb;81(4):1297-1308. doi: 10.1128/AEM.03594-14.

DOI:10.1128/AEM.03594-14
PMID:25501479
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4309690/
Abstract

Lactobacillus is the largest genus within the lactic acid bacteria (LAB), with almost 180 species currently identified. Motility has been reported for at least 13 Lactobacillus species, all belonging to the Lactobacillus salivarius clade. Motility in lactobacilli is poorly characterized. It probably confers competitive advantages, such as superior nutrient acquisition and niche colonization, but it could also play an important role in innate immune system activation through flagellin–Toll-like receptor 5 (TLR5) interaction. We now report strong evidence of motility in a species outside the L. salivarius clade, Lactobacillus curvatus (strain NRIC0822). The motility of L. curvatus NRIC 0822 was revealed by phase-contrast microscopy and soft-agar motility assays. Strain NRIC 0822 was motile at temperatures between 15 °C and 37 °C, with a range of different carbohydrates, and under varying atmospheric conditions. We sequenced the L. curvatus NRIC 0822 genome, which revealed that the motility genes are organized in a single operon and that the products are very similar (>98.5% amino acid similarity over >11,000 amino acids) to those encoded by the motility operon of Lactobacillus acidipiscis KCTC 13900 (shown for the first time to be motile also). Moreover, the presence of a large number of mobile genetic elements within and flanking the motility operon of L. curvatus suggests recent horizontal transfer between members of two distinct Lactobacillus clades: L. acidipiscis in the L. salivarius clade and L. curvatus inthe L. sakei clade. This study provides novel phenotypic, genetic, and phylogenetic insights into flagellum-mediated motility in lactobacilli.

摘要

乳酸杆菌是乳酸菌(LAB)中最大的属,目前已鉴定出近180个物种。据报道,至少有13种乳酸杆菌具有运动性,它们都属于唾液乳酸杆菌进化枝。乳酸杆菌的运动性特征尚不明确。它可能赋予竞争优势,如更好地获取营养和在生态位中定殖,但也可能通过鞭毛蛋白与Toll样受体5(TLR5)的相互作用在激活先天免疫系统中发挥重要作用。我们现在报告了唾液乳酸杆菌进化枝之外的弯曲乳酸杆菌(菌株NRIC0822)具有运动性的有力证据。通过相差显微镜和软琼脂运动性试验揭示了弯曲乳酸杆菌NRIC 0822的运动性。菌株NRIC 0822在15℃至37℃的温度范围内、在一系列不同碳水化合物存在的情况下以及在不同大气条件下均具有运动性。我们对弯曲乳酸杆菌NRIC 0822的基因组进行了测序,结果表明运动性基因组织在一个单一操纵子中,并且其产物与酸鱼乳酸杆菌KCTC 13900(首次被证明也具有运动性)的运动性操纵子编码的产物非常相似(在超过11,000个氨基酸上氨基酸相似度>98.5%)。此外,弯曲乳酸杆菌运动性操纵子内部和侧翼存在大量可移动遗传元件,这表明在两个不同的乳酸杆菌进化枝成员之间最近发生了水平转移:唾液乳酸杆菌进化枝中的酸鱼乳酸杆菌和清酒乳酸杆菌进化枝中的弯曲乳酸杆菌。这项研究为乳酸杆菌中鞭毛介导的运动性提供了新的表型、遗传和系统发育见解。

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