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动物细胞中泵 - 漏通量平衡的计算。

Computation of pump-leak flux balance in animal cells.

作者信息

Vereninov Igor A, Yurinskaya Valentina E, Model Michael A, Lang Florian, Vereninov Alexey A

机构信息

St-Petersburg State Polytechnical University, St-Petersburg, Russia.

出版信息

Cell Physiol Biochem. 2014;34(5):1812-23. doi: 10.1159/000366382. Epub 2014 Nov 18.

Abstract

BACKGROUND/AIMS: Many vital processes in animal cells depend on monovalent ion transport across the plasma membrane via specific pathways. Their operation is described by a set of nonlinear and transcendental equations that cannot be solved analytically. Previous computations had been optimized for certain cell types and included parameters whose experimental determination can be challenging.

METHODS

We have developed a simpler and a more universal computational approach by using fewer kinetic parameters derived from the data related to cell balanced state. A file is provided for calculating unidirectional Na(+), K(+), and Cl(-) fluxes via all major pathways (i.e. the Na/K pump, Na(+), K(+), Cl(-) channels, and NKCC, KC and NC cotransporters) under a balanced state and during transient processes.

RESULTS

The data on the Na(+), K(+), and Cl(-) distribution and the pump flux of K(+) (Rb(+)) are obtained on U937 cells before and after inhibiting the pump with ouabain. There was a good match between the results of calculations and the experimentally measured dynamics of ion redistribution caused by blocking the pump.

CONCLUSION

The presented approach can serve as an effective tool for analyzing monovalent ion transport in the whole cell, determination of the rate coefficients for ion transfer via major pathways and studying their alteration under various conditions.

摘要

背景/目的:动物细胞中的许多重要过程依赖于单价离子通过特定途径跨质膜的转运。它们的运作由一组非线性和超越方程描述,这些方程无法通过解析求解。先前的计算针对某些细胞类型进行了优化,并且包含一些实验测定具有挑战性的参数。

方法

我们通过使用从与细胞平衡状态相关的数据中得出的较少动力学参数,开发了一种更简单、更通用的计算方法。提供了一个文件,用于计算在平衡状态和瞬态过程中通过所有主要途径(即钠钾泵、钠、钾、氯通道以及钠钾氯共转运体、钾氯共转运体和钠氯共转运体)的单向钠、钾和氯通量。

结果

在用哇巴因抑制泵前后,在U937细胞上获得了钠、钾和氯分布以及钾(铷)泵通量的数据。计算结果与通过阻断泵引起的离子重新分布的实验测量动力学之间有很好的匹配。

结论

所提出的方法可作为分析全细胞中单价离子转运、确定通过主要途径的离子转移速率系数以及研究它们在各种条件下变化的有效工具。

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