Libri D, Marie J, Brody E, Fiszman M Y
Molecular Biology Department, Pasteur Institute, Paris, France.
Nucleic Acids Res. 1989 Aug 25;17(16):6449-62. doi: 10.1093/nar/17.16.6449.
A subgenomic fragment of the chicken beta tropomyosin gene which contains two alternative exons flanked by common exons was isolated and placed under the control of the SV 40 early promoter. This construction was subsequently used to transfect quail myoblasts together with a Neomycin resistance gene, and to isolate stable transfectants. mRNAs were isolated before and after differentiation and analyzed using a modification of the primer extension method. We show that myoblasts accumulate transcripts which contain the non muscle specific exon joined to the common exons while myotubes accumulate transcripts containing the muscle specific exon. These results, therefore demonstrate that such a subgenomic fragment contains all the necessary information to direct a correct developmentally regulated mutually exclusive splicing. They also strongly suggest that trans acting factors must be involved in the switch of the splicing pattern which takes place during the transition from myoblasts to myotubes. The same regulation cannot be faithfully reproduced during transient expression, since no difference in the use of exons 6A/6B is observed during differentiation and two aberrant minor splicing products are obtained which contain or lack both exons. We suggest that failure of exon 6A to splice to exon 6B is due to the existence of some structural constraints which lower the efficiency with which the intron between them is excised.
分离出鸡β-原肌球蛋白基因的一个亚基因组片段,该片段包含两个由共同外显子侧翼的可变外显子,并将其置于SV40早期启动子的控制之下。随后,将此构建体与新霉素抗性基因一起用于转染鹌鹑成肌细胞,并分离出稳定的转染子。在分化前后分离mRNA,并使用引物延伸法的一种改进方法进行分析。我们发现,成肌细胞积累的转录本包含与共同外显子相连的非肌肉特异性外显子,而成肌管积累的转录本包含肌肉特异性外显子。因此,这些结果表明,这样一个亚基因组片段包含指导正确的发育调控的互斥剪接所需的所有信息。它们还强烈表明,反式作用因子必定参与了从成肌细胞向肌管转变过程中发生的剪接模式的转换。在瞬时表达过程中无法忠实地再现相同的调控,因为在分化过程中未观察到外显子6A/6B使用上的差异,并且获得了两种异常的次要剪接产物,它们分别包含或缺失这两个外显子。我们认为,外显子6A不能与外显子6B剪接是由于存在一些结构限制,这些限制降低了它们之间内含子的切除效率。