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端粒重排的分子细胞遗传学分析

Molecular cytogenetic analysis of telomere rearrangements.

作者信息

Martin Christa Lese, Ledbetter David H

机构信息

Autism and Developmental Medicine Institute, Geisinger Health System, Danville, Pennsylvania.

出版信息

Curr Protoc Hum Genet. 2015 Jan 20;84:8.11.1-8.11.15. doi: 10.1002/0471142905.hg0811s84.

DOI:10.1002/0471142905.hg0811s84
PMID:25599669
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4410364/
Abstract

Genomic imbalances involving the telomeric regions of human chromosomes, which contain the highest gene concentration in the genome, are proposed to have severe phenotypic consequences. For this reason, it is important to identify telomere rearrangements and assess their contribution to human pathology. This unit describes the structure and function of human telomeres and outlines several methodologies that can be employed to study these unique regions of human chromosomes. It is a revision of the original version of the unit published in 2000, now including an introductory section describing advances in the discipline that have taken place since the original publication.

摘要

涉及人类染色体端粒区域的基因组失衡被认为会产生严重的表型后果,而端粒区域是基因组中基因浓度最高的地方。因此,识别端粒重排并评估它们对人类病理学的影响非常重要。本单元描述了人类端粒的结构和功能,并概述了几种可用于研究人类染色体这些独特区域的方法。它是2000年出版的该单元原始版本的修订版,现在包括一个介绍性部分,描述自原始出版物以来该学科取得的进展。

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1
Molecular cytogenetic analysis of telomere rearrangements.端粒重排的分子细胞遗传学分析
Curr Protoc Hum Genet. 2015 Jan 20;84:8.11.1-8.11.15. doi: 10.1002/0471142905.hg0811s84.
2
Molecular cytogenetic analysis of telomere rearrangements.端粒重排的分子细胞遗传学分析
Curr Protoc Hum Genet. 2001 May;Chapter 8:Unit 8.11. doi: 10.1002/0471142905.hg0811s24.
3
Direct fluorescence in situ hybridization on human metaphase chromosomes using quantum dot-platinum labeled DNA probes.使用量子点-铂标记的DNA探针在人类中期染色体上进行直接荧光原位杂交。
Biochem Biophys Res Commun. 2015 Nov 13;467(2):328-33. doi: 10.1016/j.bbrc.2015.09.161. Epub 2015 Oct 9.
4
An optimized set of human telomere clones for studying telomere integrity and architecture.一组经过优化的用于研究端粒完整性和结构的人类端粒克隆。
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Rapid generation of region specific probes by chromosome microdissection and their application.通过染色体显微切割快速生成区域特异性探针及其应用
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Alternative lengthening of telomeres: recurrent cytogenetic aberrations and chromosome stability under extreme telomere dysfunction.端粒的替代性延长:端粒功能极度失调下的反复细胞遗传学异常和染色体稳定性。
Neoplasia. 2013 Nov;15(11):1301-13. doi: 10.1593/neo.131574.
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Cryptic translocation identification in human and mouse using several telomeric multiplex fish (TM-FISH) strategies.使用多种端粒多重荧光原位杂交(TM-FISH)策略鉴定人和小鼠中的隐匿易位。
Lab Invest. 2001 Apr;81(4):483-91. doi: 10.1038/labinvest.3780256.
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Translocation breakpoint mapping and sequence analysis in three monosomy 1p36 subjects with der(1)t(1;1)(p36;q44) suggest mechanisms for telomere capture in stabilizing de novo terminal rearrangements.对三名患有der(1)t(1;1)(p36;q44)的1p36单体综合征患者进行易位断点定位和序列分析,揭示了端粒捕获在稳定新生末端重排中的机制。
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Measurements of telomere length on individual chromosomes by image cytometry.通过图像细胞术测量单个染色体上的端粒长度。
Methods Cell Biol. 2001;64:69-96. doi: 10.1016/s0091-679x(01)64007-x.
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Cytogenetic molecular delineation of a terminal 18q deletion suggesting neo-telomere formation.18号染色体长臂末端缺失的细胞遗传学分子描绘提示新端粒形成。
Eur J Med Genet. 2010 Nov-Dec;53(6):404-7. doi: 10.1016/j.ejmg.2010.08.007. Epub 2010 Sep 15.

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Prenatal Diagnosis by Chromosome Microarray Analysis, An Indian Experience.染色体微阵列分析在产前诊断中的应用:印度经验
J Obstet Gynaecol India. 2021 Apr;71(2):156-167. doi: 10.1007/s13224-020-01413-6. Epub 2021 Jan 19.

本文引用的文献

1
ACMG Standards and Guidelines for constitutional cytogenomic microarray analysis, including postnatal and prenatal applications: revision 2013.ACMG 标准和指南:用于结构细胞遗传学微阵列分析的标准和指南,包括产后和产前应用:2013 年修订版。
Genet Med. 2013 Nov;15(11):901-9. doi: 10.1038/gim.2013.129. Epub 2013 Sep 26.
2
Oligonucleotide microarrays for clinical diagnosis of copy number variation and zygosity status.用于拷贝数变异和纯合性状态临床诊断的寡核苷酸微阵列。
Curr Protoc Hum Genet. 2012 Jul;Chapter 8:Unit8.12. doi: 10.1002/0471142905.hg0812s74.
3
Interpretation of genomic copy number variants using DECIPHER.使用DECIPHER解释基因组拷贝数变异
Curr Protoc Hum Genet. 2012 Jan;Chapter 8:Unit 8.14. doi: 10.1002/0471142905.hg0814s72.
4
Array-based technology and recommendations for utilization in medical genetics practice for detection of chromosomal abnormalities.基于阵列的技术及其在医学遗传学实践中用于检测染色体异常的应用建议。
Genet Med. 2010 Nov;12(11):742-5. doi: 10.1097/GIM.0b013e3181f8baad.
5
Diagnosis of cryptic chromosomal syndromes by fluorescence in situ hybridization (FISH).通过荧光原位杂交(FISH)诊断隐匿性染色体综合征
Curr Protoc Hum Genet. 2010 Oct;Chapter 8:Unit 8.10.1-20. doi: 10.1002/0471142905.hg0810s67.
6
Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.共识声明:对于患有发育障碍或先天畸形的个体,染色体微阵列是一线临床诊断测试。
Am J Hum Genet. 2010 May 14;86(5):749-64. doi: 10.1016/j.ajhg.2010.04.006.
7
Use of Affymetrix mapping arrays in the diagnosis of gene copy number variation.Affymetrix 定位阵列在基因拷贝数变异诊断中的应用。
Curr Protoc Hum Genet. 2008 Oct;Chapter 8:Unit 8.13. doi: 10.1002/0471142905.hg0813s59.
8
Identification of chromosome abnormalities in subtelomeric regions by microarray analysis: a study of 5,380 cases.通过微阵列分析鉴定亚端粒区域的染色体异常:5380例病例的研究
Am J Med Genet A. 2008 Sep 1;146A(17):2242-51. doi: 10.1002/ajmg.a.32399.
9
Enhanced detection of clinically relevant genomic imbalances using a targeted plus whole genome oligonucleotide microarray.使用靶向加全基因组寡核苷酸微阵列增强对临床相关基因组失衡的检测。
Genet Med. 2008 Jun;10(6):415-29. doi: 10.1097/GIM.0b013e318177015c.
10
In situ hybridization to metaphase chromosomes and interphase nuclei.中期染色体和间期细胞核的原位杂交。
Curr Protoc Hum Genet. 2005 May;Chapter 4:Unit 4.3. doi: 10.1002/0471142905.hg0403s45.