• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

KH与RNA的相互作用:回归正轨。

KH-RNA interactions: back in the groove.

作者信息

Nicastro Giuseppe, Taylor Ian A, Ramos Andres

机构信息

Division of Molecular Structure, MRC National Institute for Medical Research, London, UK.

Research Department of Structural and Molecular Biology, University College London, London, UK; Division of Molecular Structure, MRC National Institute for Medical Research, London, UK.

出版信息

Curr Opin Struct Biol. 2015 Feb;30:63-70. doi: 10.1016/j.sbi.2015.01.002. Epub 2015 Jan 24.

DOI:10.1016/j.sbi.2015.01.002
PMID:25625331
Abstract

The hnRNP K-homology (KH) domain is a single stranded nucleic acid binding domain that mediates RNA target recognition by a large group of gene regulators. The structure of the KH fold is well characterised and some initial rules for KH-RNA recognition have been drafted. However, recent findings have shown that these rules need to be revisited and have now provided a better understanding of how the domain can recognise a sequence landscape larger than previously thought as well as revealing the diversity of structural expansions to the KH domain. Finally, novel structural and functional data show how multiple KH domains act in a combinatorial fashion to both allow recognition of longer RNA motifs and remodelling of the RNA structure. These advances set the scene for a detailed molecular understanding of KH selection of the cellular targets.

摘要

不均一核糖核蛋白K同源(KH)结构域是一种单链核酸结合结构域,由一大类基因调节因子介导RNA靶标的识别。KH折叠的结构已得到充分表征,并且已经起草了一些KH-RNA识别的初步规则。然而,最近的研究结果表明,这些规则需要重新审视,现在已经对该结构域如何识别比以前认为的更大的序列格局以及揭示KH结构域的结构扩展多样性有了更好的理解。最后,新的结构和功能数据表明多个KH结构域如何以组合方式发挥作用,既能识别更长的RNA基序,又能重塑RNA结构。这些进展为详细分子理解KH对细胞靶标的选择奠定了基础。

相似文献

1
KH-RNA interactions: back in the groove.KH与RNA的相互作用:回归正轨。
Curr Opin Struct Biol. 2015 Feb;30:63-70. doi: 10.1016/j.sbi.2015.01.002. Epub 2015 Jan 24.
2
Cooperative binding of the hnRNP K three KH domains to mRNA targets.异质性核糖核蛋白K的三个KH结构域与mRNA靶标的协同结合。
FEBS Lett. 2004 Nov 5;577(1-2):134-40. doi: 10.1016/j.febslet.2004.08.086.
3
Optimized RNA targets of two closely related triple KH domain proteins, heterogeneous nuclear ribonucleoprotein K and alphaCP-2KL, suggest Distinct modes of RNA recognition.两种密切相关的三重KH结构域蛋白——不均一核核糖核蛋白K和αCP-2KL的优化RNA靶点表明了不同的RNA识别模式。
J Biol Chem. 2001 May 18;276(20):17484-96. doi: 10.1074/jbc.M010594200. Epub 2001 Feb 2.
4
Molecular basis of sequence-specific single-stranded DNA recognition by KH domains: solution structure of a complex between hnRNP K KH3 and single-stranded DNA.KH结构域对序列特异性单链DNA识别的分子基础:hnRNP K KH3与单链DNA复合物的溶液结构
EMBO J. 2002 Jul 1;21(13):3476-85. doi: 10.1093/emboj/cdf352.
5
X-ray crystallographic and NMR studies of the third KH domain of hnRNP K in complex with single-stranded nucleic acids.异质性核糖核蛋白K(hnRNP K)第三个KH结构域与单链核酸复合物的X射线晶体学和核磁共振研究。
Structure. 2005 Jul;13(7):1055-67. doi: 10.1016/j.str.2005.04.008.
6
Structure and function of KH domains.KH结构域的结构与功能。
FEBS J. 2008 Jun;275(11):2712-26. doi: 10.1111/j.1742-4658.2008.06411.x. Epub 2008 Apr 15.
7
Characterisation of the nucleic-acid-binding activity of KH domains. Different properties of different domains.KH结构域的核酸结合活性表征。不同结构域的不同特性。
Eur J Biochem. 1996 Oct 15;241(2):425-31. doi: 10.1111/j.1432-1033.1996.00425.x.
8
The DICE-binding activity of KH domain 3 of hnRNP K is affected by c-Src-mediated tyrosine phosphorylation.异质性核糖核蛋白K的KH结构域3的DICE结合活性受c-Src介导的酪氨酸磷酸化影响。
J Mol Biol. 2006 Aug 18;361(3):470-81. doi: 10.1016/j.jmb.2006.06.025. Epub 2006 Jun 30.
9
Deciphering the cross talk between hnRNP K and c-Src: the c-Src activation domain in hnRNP K is distinct from a second interaction site.解析异质性核糖核蛋白K(hnRNP K)与c-Src之间的相互作用:hnRNP K中的c-Src激活结构域与第二个相互作用位点不同。
Mol Cell Biol. 2007 Mar;27(5):1758-70. doi: 10.1128/MCB.02014-06. Epub 2006 Dec 18.
10
X-ray crystallographic and NMR studies of protein-protein and protein-nucleic acid interactions involving the KH domains from human poly(C)-binding protein-2.关于涉及人类聚(C)结合蛋白-2的KH结构域的蛋白质-蛋白质和蛋白质-核酸相互作用的X射线晶体学和核磁共振研究。
RNA. 2007 Jul;13(7):1043-51. doi: 10.1261/rna.410107. Epub 2007 May 25.

引用本文的文献

1
KH-R3H domain cooperation in RNA recognition by the global RNA-binding protein KhpB.全局RNA结合蛋白KhpB在RNA识别中的KH-R3H结构域协同作用。
Nat Commun. 2025 Sep 3;16(1):8028. doi: 10.1038/s41467-025-62302-y.
2
Deciphering the RNA recognition by Musashi-1 to design protein and RNA variants for in vitro and in vivo applications.解析Musashi-1对RNA的识别机制,以设计用于体外和体内应用的蛋白质和RNA变体。
Nucleic Acids Res. 2025 Aug 11;53(15). doi: 10.1093/nar/gkaf741.
3
RNA sculpting by the primordial Helix-clasp-Helix-Strand-Loop (HcH-SL) motif enforces chemical recognition enabling diverse KH domain functions.
由原始螺旋-扣-螺旋-链-环(HcH-SL)基序进行的RNA塑造强化了化学识别,从而实现了多种KH结构域功能。
J Biol Chem. 2025 May;301(5):108474. doi: 10.1016/j.jbc.2025.108474. Epub 2025 Apr 2.
4
Structural and functional characterization of the extended-diKH domain from the antiviral endoribonuclease KHNYN.抗病毒核糖核酸内切酶KHNYN的扩展二聚体KH结构域的结构与功能表征
J Biol Chem. 2025 Apr;301(4):108336. doi: 10.1016/j.jbc.2025.108336. Epub 2025 Feb 19.
5
RNase Y mediates posttranscriptional control of the virulence-associated CncR1 small-RNA in .核糖核酸酶Y介导了[具体物种]中与毒力相关的CncR1小RNA的转录后调控。
iScience. 2025 Jan 16;28(2):111815. doi: 10.1016/j.isci.2025.111815. eCollection 2025 Feb 21.
6
A minimal complex of KHNYN and zinc-finger antiviral protein binds and degrades single-stranded RNA.KHNYN与锌指抗病毒蛋白的最小复合物结合并降解单链RNA。
Proc Natl Acad Sci U S A. 2024 Dec 24;121(52):e2415048121. doi: 10.1073/pnas.2415048121. Epub 2024 Dec 18.
7
Endo-bind-n-seq: identifying RNA motifs of RNA binding proteins isolated from endogenous sources.内源性结合RNA测序(Endo-bind-n-seq):鉴定从内源性来源分离的RNA结合蛋白的RNA基序
Life Sci Alliance. 2024 Dec 2;8(2). doi: 10.26508/lsa.202402782. Print 2025 Feb.
8
Interactive Structural Analysis of KH3-4 Didomains of IGF2BPs with Preferred RNA Motif Having mA Through Dynamics Simulation Studies.通过动力学模拟研究与 mA 具有偏好 RNA 基序的 IGF2BPs 的 KH3-4 二结构域的相互作用结构分析。
Int J Mol Sci. 2024 Oct 16;25(20):11118. doi: 10.3390/ijms252011118.
9
Ubiquitylation of nucleic acids by DELTEX ubiquitin E3 ligase DTX3L.DELTEX 泛素连接酶 DTX3L 对核酸的泛素化。
EMBO Rep. 2024 Oct;25(10):4172-4189. doi: 10.1038/s44319-024-00235-1. Epub 2024 Sep 6.
10
A K homology (KH) domain protein identified by a forward genetic screen affects bundle sheath anatomy in .通过正向遗传学筛选鉴定出的一种KH结构域蛋白影响了……中的维管束鞘解剖结构。
Plant Direct. 2024 Apr 3;8(4):e577. doi: 10.1002/pld3.577. eCollection 2024 Apr.