Sirko Agnieszka, Wawrzyńska Anna, Rodríguez Milagros Collados, Sęktas Pawel
Institute of Biochemistry and Biophysics, Polish Academy of Sciences Warsaw, Poland.
Front Plant Sci. 2015 Jan 13;5:774. doi: 10.3389/fpls.2014.00774. eCollection 2014.
The plant response to sulfur deficiency includes extensive metabolic changes which can be monitored at various levels (transcriptome, proteome, metabolome) even before the first visible symptoms of sulfur starvation appear. Four members of the plant-specific LSU (response to Low SUlfur) gene family occur in Arabidopsis thaliana (LSU1-4). Variable numbers of LSU genes occur in other plant species but they were studied only in Arabidopsis and tobacco. Three out of four of the Arabidopsis LSU genes are induced by sulfur deficiency. The LSU-like genes in tobacco were characterized as UP9 (UPregulated by sulfur deficit 9). LSU-like proteins do not have characteristic domains that provide clues to their function. Despite having only moderate primary sequence conservation they share several common features including small size, a coiled-coil secondary structure and short conserved motifs in specific positions. Although the precise function of LSU-like proteins is still unknown there is some evidence that members of the LSU family are involved in plant responses to environmental challenges, such as sulfur deficiency, and possibly in plant immune responses. Various bioinformatic approaches have identified LSU-like proteins as important hubs for integration of signals from environmental stimuli. In this paper we review a variety of published data on LSU gene expression, the properties of lsu mutants and features of LSU-like proteins in the hope of shedding some light on their possible role in plant metabolism.
植物对硫缺乏的响应包括广泛的代谢变化,即使在硫饥饿的最初可见症状出现之前,这些变化也可以在各个层面(转录组、蛋白质组、代谢组)进行监测。拟南芥中存在植物特有的LSU(对低硫的响应)基因家族的四个成员(LSU1 - 4)。其他植物物种中存在数量不等的LSU基因,但仅在拟南芥和烟草中对其进行了研究。拟南芥的四个LSU基因中有三个受硫缺乏诱导。烟草中的LSU样基因被鉴定为UP9(受硫缺乏上调9)。LSU样蛋白没有能为其功能提供线索的特征结构域。尽管它们的一级序列保守性一般,但它们具有几个共同特征,包括小尺寸、卷曲螺旋二级结构以及特定位置的短保守基序。尽管LSU样蛋白的确切功能仍然未知,但有一些证据表明LSU家族成员参与植物对环境挑战(如硫缺乏)的响应,并且可能参与植物免疫反应。各种生物信息学方法已将LSU样蛋白鉴定为整合来自环境刺激信号的重要枢纽。在本文中,我们综述了关于LSU基因表达、lsu突变体特性以及LSU样蛋白特征的各种已发表数据,希望能阐明它们在植物代谢中可能发挥的作用。