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成熟瓠瓜种子的蛋白质组学分析。

Proteomic analysis of mature Lagenaria siceraria seed.

作者信息

Kumari Neha, Tajmul Md, Yadav Savita

机构信息

Department of Biophysics, All India Institute of Medical Sciences, New Delhi, 110029, India.

出版信息

Appl Biochem Biotechnol. 2015 Apr;175(8):3643-56. doi: 10.1007/s12010-015-1532-3. Epub 2015 Feb 12.

Abstract

Lagenaria siceraria (bottle gourd) class belongs to Magnoliopsida family curcurbitaceae that is a traditionally used medicinal plant. Fruit of this plant are widely used as a therapeutic vegetable in various diseases, all over the Asia and Africa. Various parts of this plant like fruit, seed, leaf and root are used as alternative medicine. In the present study, primarily, we have focused on proteomic analysis of L. siceraria seed using phenol extraction method for protein isolation. Twenty-four colloidal coomassie blue stained protein spots were identified by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF/MS) after resolving on two-dimensional gel electrophoresis. Out of 24 identified protein spots, four were grouped as unidentified proteins which clearly suggest that less work has been done in the direction of plant seed proteomics. These proteins have been found to implicate in various functions such as biosynthesis of plant cell wall polysaccharides and glycoproteins, serine/threonine kinase activity, plant disease resistance and transferase activity against insects by means of insecticidal and larval growth inhibitory, anti-HIV, antihelmintic and antimicrobial properties. By Blast2GO annotation analysis, amongst the identified proteins of L. siceraria, molecular function for majority of proteins has indispensable role in catalytic activity, few in binding activity and antioxidant activity; it is mostly distributed in cell, organelle, membrane and macromolecular complex. Most of them involved in biological process such as metabolic process, cellular process, response to stimulus, single organism process, signalling, biological recognition, cellular component organization or biogenesis and localization.

摘要

葫芦科葫芦属植物(葫芦)属于双子叶植物纲葫芦科,是一种传统的药用植物。在亚洲和非洲各地,这种植物的果实被广泛用作治疗多种疾病的蔬菜。该植物的各个部分,如果实、种子、叶子和根,都被用作替代药物。在本研究中,我们主要采用酚提取法分离蛋白质,对葫芦种子进行蛋白质组学分析。在二维凝胶电泳分离后,通过基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF/MS)鉴定出24个考马斯亮蓝染色的蛋白质斑点。在鉴定出的24个蛋白质斑点中,有4个被归类为未鉴定蛋白质,这清楚地表明在植物种子蛋白质组学方面的研究较少。这些蛋白质被发现具有多种功能,如植物细胞壁多糖和糖蛋白的生物合成、丝氨酸/苏氨酸激酶活性、植物抗病性以及通过杀虫和抑制幼虫生长、抗HIV、抗蠕虫和抗菌特性对昆虫的转移酶活性。通过Blast2GO注释分析,在鉴定出的葫芦蛋白质中,大多数蛋白质的分子功能在催化活性中具有不可或缺的作用,少数在结合活性和抗氧化活性中具有作用;它们主要分布在细胞、细胞器、膜和大分子复合物中。它们中的大多数参与生物过程,如代谢过程、细胞过程、对刺激的反应、单细胞生物过程、信号传导、生物识别、细胞成分组织或生物发生以及定位。

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