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一种多靶点参考质粒作为校准物用于分析五种转基因大豆事件的开发与应用

Development and application of a multi-targeting reference plasmid as calibrator for analysis of five genetically modified soybean events.

作者信息

Pi Liqun, Li Xiang, Cao Yiwei, Wang Canhua, Pan Liangwen, Yang Litao

机构信息

Collaborative Innovation Center for Biosafety of GMOs, National Center for the Molecular Characterization of Genetically Modified Organisms, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China.

出版信息

Anal Bioanal Chem. 2015 Apr;407(10):2877-86. doi: 10.1007/s00216-015-8517-5. Epub 2015 Feb 12.

Abstract

Reference materials are important in accurate analysis of genetically modified organism (GMO) contents in food/feeds, and development of novel reference plasmid is a new trend in the research of GMO reference materials. Herein, we constructed a novel multi-targeting plasmid, pSOY, which contained seven event-specific sequences of five GM soybeans (MON89788-5', A2704-12-3', A5547-127-3', DP356043-5', DP305423-3', A2704-12-5', and A5547-127-5') and sequence of soybean endogenous reference gene Lectin. We evaluated the specificity, limit of detection and quantification, and applicability of pSOY in both qualitative and quantitative PCR analyses. The limit of detection (LOD) was as low as 20 copies in qualitative PCR, and the limit of quantification (LOQ) in quantitative PCR was 10 copies. In quantitative real-time PCR analysis, the PCR efficiencies of all event-specific and Lectin assays were higher than 90%, and the squared regression coefficients (R(2)) were more than 0.999. The quantification bias varied from 0.21% to 19.29%, and the relative standard deviations were from 1.08% to 9.84% in simulated samples analysis. All the results demonstrated that the developed multi-targeting plasmid, pSOY, was a credible substitute of matrix reference materials, and could be used as a reliable reference calibrator in the identification and quantification of multiple GM soybean events.

摘要

参考物质对于准确分析食品/饲料中的转基因生物(GMO)含量非常重要,新型参考质粒的开发是转基因生物参考物质研究的新趋势。在此,我们构建了一种新型多靶点质粒pSOY,它包含五种转基因大豆(MON89788-5'、A2704-12-3'、A5547-127-3'、DP356043-5'、DP305423-3'、A2704-12-5'和A5547-127-5')的七个事件特异性序列以及大豆内参基因凝集素的序列。我们评估了pSOY在定性和定量PCR分析中的特异性、检测限和定量限以及适用性。定性PCR中的检测限(LOD)低至20拷贝,定量PCR中的定量限(LOQ)为10拷贝。在定量实时PCR分析中,所有事件特异性和凝集素检测的PCR效率均高于90%,平方回归系数(R²)大于0.999。在模拟样品分析中,定量偏差在0.21%至19.29%之间,相对标准偏差在1.08%至9.84%之间。所有结果表明,所开发的多靶点质粒pSOY是基质参考物质的可靠替代品,可作为多种转基因大豆事件鉴定和定量的可靠参考校准物。

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