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一种新颖的 t 统计量应用,客观评估 P-糖蛋白和其他转运体的 IC50 拟合质量。

A novel application of t-statistics to objectively assess the quality of IC50 fits for P-glycoprotein and other transporters.

机构信息

Department of Biodiversity, Earth and Environmental Science, Drexel University Philadelphia, Pennsylvania ; Department of Biology, Drexel University Philadelphia, Pennsylvania.

Drug Metabolism and Pharmacokinetics, QPS Research Triangle Park, North Carolina.

出版信息

Pharmacol Res Perspect. 2015 Feb;3(1):e00078. doi: 10.1002/prp2.78. Epub 2014 Dec 2.

Abstract

Current USFDA and EMA guidance for drug transporter interactions is dependent on IC50 measurements as these are utilized in determining whether a clinical interaction study is warranted. It is therefore important not only to standardize transport inhibition assay systems but also to develop uniform statistical criteria with associated probability statements for generation of robust IC50 values, which can be easily adopted across the industry. The current work provides a quantitative examination of critical factors affecting the quality of IC50 fits for P-gp inhibition through simulations of perfect data with randomly added error as commonly observed in the large data set collected by the P-gp IC50 initiative. The types of errors simulated were (1) variability in replicate measures of transport activity; (2) transformations of error-contaminated transport activity data prior to IC50 fitting (such as performed when determining an IC50 for inhibition of P-gp based on efflux ratio); and (3) the lack of well defined "no inhibition" and "complete inhibition" plateaus. The effect of the algorithm used in fitting the inhibition curve (e.g., two or three parameter fits) was also investigated. These simulations provide strong quantitative support for the recommendations provided in Bentz et al. (2013) for the determination of IC50 values for P-gp and demonstrate the adverse effect of data transformation prior to fitting. Furthermore, the simulations validate uniform statistical criteria for robust IC50 fits in general, which can be easily implemented across the industry. A calibration of the t-statistic is provided through calculation of confidence intervals associated with the t-statistic.

摘要

当前,美国食品药品监督管理局(FDA)和欧洲药品管理局(EMA)对药物转运体相互作用的指导原则依赖于 IC50 测量值,因为这些测量值用于确定是否需要进行临床相互作用研究。因此,不仅要标准化转运抑制测定系统,还要开发具有相关概率陈述的统一统计标准,以生成稳健的 IC50 值,这在整个行业中都可以轻松采用。目前的工作通过模拟具有随机添加误差的完美数据,对影响 P-糖蛋白(P-gp)抑制 IC50 拟合质量的关键因素进行了定量检查,这些误差是在由 P-gp IC50 倡议收集的大型数据集通常观察到的。模拟的误差类型包括:(1)转运活性重复测量的变异性;(2)在进行 IC50 拟合之前对受误差污染的转运活性数据进行转换(例如,基于外排比确定对 P-gp 抑制的 IC50 时);(3)缺乏明确的“无抑制”和“完全抑制”平台。拟合抑制曲线所使用的算法(例如,双参数或三参数拟合)的效果也进行了研究。这些模拟为 Bentz 等人(2013 年)确定 P-gp 的 IC50 值提供了强有力的定量支持,并证明了在拟合之前对数据进行转换的不利影响。此外,这些模拟验证了稳健的 IC50 拟合的统一统计标准,这在整个行业中都可以轻松实现。通过计算与 t 统计量相关的置信区间,提供了 t 统计量的校准。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6013/4317220/ec2c7afd9671/prp20003-e00078-f1.jpg

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