Huang Fu-Yi, Li Hu, Wei Bei, Ouyang Wei-Ying, Su Jian-Qiang
Huan Jing Ke Xue. 2014 Oct;35(10):3869-73.
To investigate the effect of long-term manure application on the profiles of antibiotic resistance genes (ARGs) in paddy soil, the abundance of ARGs targeted by 295 primers sets were measured by using high-throughput quantitative PCR technique. A total of 107 types of ARGs were detected in long-term manured paddy soil, which is significantly higher than that in control paddy soil (P < 0.05). PCA analysis and UPGMA cluster demonstrated that long-term manure application significantly changed the ARGs diversity and abundance in paddy soils. There were 49 types antibiotic resistance genes were enriched significantly in paddy soil applied with manure (P < 0.05), especially the mexF, which belongs to quinolones-chloramphenicol resistance genes, increased 1791-fold compared with paddy soil of no manure application. Our results showed that long-term application of manure in paddy soil resulted in the shift of abundance and diversity of ARGs, high-throughput quantitative PCR could be a powerful tool concerning the environmental ARGs dimensions.
为研究长期施用有机肥对稻田土壤抗生素抗性基因(ARGs)谱的影响,采用高通量定量PCR技术测定了295对引物靶向的ARGs丰度。长期施用有机肥的稻田土壤中共检测到107种ARGs,显著高于对照稻田土壤(P<0.05)。主成分分析(PCA)和非加权组平均法(UPGMA)聚类分析表明,长期施用有机肥显著改变了稻田土壤中ARGs的多样性和丰度。在施用有机肥的稻田土壤中有49种抗生素抗性基因显著富集(P<0.05),尤其是属于喹诺酮-氯霉素抗性基因的mexF,与未施用有机肥的稻田土壤相比增加了1791倍。我们的结果表明,长期在稻田土壤中施用有机肥导致了ARGs丰度和多样性的变化,高通量定量PCR可能是研究环境中ARGs维度的有力工具。