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澳大利亚淡水虾澳洲副匙指虾(Paratya australiensis Kemp,1917)(甲壳纲:十足目:匙指虾科)的完整线粒体基因组。

The complete mitogenome of the Australian freshwater shrimp Paratya australiensis Kemp, 1917 (Crustacea: Decapoda: Atyidae).

作者信息

Gan Huan You, Gan Han Ming, Lee Yin Peng, Austin Christopher M

机构信息

a School of Science, Monash University, Jalan Lagoon Selatan , Selangor , Malaysia and.

b Monash University Malaysia Genomics Facility , Monash University, Jalan Lagoon Selatan , Selangor , Malaysia.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3157-8. doi: 10.3109/19401736.2015.1007312. Epub 2015 Feb 19.

Abstract

The mitochondrial genome sequence of the Australian freshwater shrimp, Paratya australiensis, is presented, which is the fourth for genera of the superfamily Atyoidea and the first atyid from the southern hemisphere. The base composition of the P. australiensis, mitogenome is 33.55% for T, 18.24% for C, 35.16% for A, and 13.06% for G, with an AT bias of 71.58%. It has a mitogenome of 15,990 base pairs comprised of 13 protein-coding, 2 ribosomal subunit and 22 transfer RNAs genes and a non-coding AT-rich region. The mitogenome gene order for the species is typical for atyid shrimps, which conform to the primitive pan crustacean model.

摘要

本文公布了澳大利亚淡水虾——澳洲副匙指虾(Paratya australiensis)的线粒体基因组序列,这是匙指虾总科属的第四个线粒体基因组序列,也是南半球首个匙指虾科序列。澳洲副匙指虾线粒体基因组的碱基组成为:胸腺嘧啶(T)占33.55%,胞嘧啶(C)占18.24%,腺嘌呤(A)占35.16%,鸟嘌呤(G)占13.06%,AT偏倚率为71.58%。它的线粒体基因组有15,990个碱基对,由13个蛋白质编码基因、2个核糖体亚基基因、22个转运RNA基因和一个富含AT的非编码区组成。该物种的线粒体基因组基因排列顺序是匙指虾科典型的排列顺序,符合原始泛甲壳动物模型。

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