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寄居蟹(Clibanarius infraspinatus (Hilgendorf, 1869))(甲壳纲;十足目;陆寄居蟹科)的完整线粒体基因组——十足目的一种新基因排列。

The complete mitogenome of the hermit crab Clibanarius infraspinatus (Hilgendorf, 1869), (Crustacea; Decapoda; Diogenidae) - a new gene order for the Decapoda.

作者信息

Gan Huan You, Gan Han Ming, Tan Mun Hua, Lee Yin Peng, Austin Christopher M

机构信息

a School of Science, Monash University Malaysia , Petaling Jaya , Selangor , Malaysia and.

b Monash University Malaysia Genomics Facility , Petaling Jaya , Selangor , Malaysia.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4099-4100. doi: 10.3109/19401736.2014.1003862. Epub 2015 Jan 28.

DOI:10.3109/19401736.2014.1003862
PMID:25629489
Abstract

The complete mitochondrial genome of the hermit crab Clibanarius infraspinatus was recovered by genome skimming using Next-Gen sequencing. The Clibanarius infraspinatus mitogenome has 16,504 base pairs (67.94% A + T content) made up of 13 protein-coding genes, 2 ribosomal subunit genes, 22 transfer RNAs and a putative 1500 bp non-coding AT-rich region. The Clibanarius infraspinatus mitogenome sequence is the first for the family Diogenidae and the second for the superfamily Paguroidea and exhibits a translocation of the ND3 gene not previously reported for the Decapoda.

摘要

通过下一代测序的基因组鸟枪法测序,获得了寄居蟹(Clibanarius infraspinatus)的完整线粒体基因组。Clibanarius infraspinatus的线粒体基因组有16,504个碱基对(A+T含量为67.94%),由13个蛋白质编码基因、2个核糖体亚基基因、22个转运RNA和一个推测的1500bp富含AT的非编码区域组成。Clibanarius infraspinatus的线粒体基因组序列是毛刺蟹科的首个序列,也是寄居蟹总科的第二个序列,并且显示出十足目此前未报道过的ND3基因易位。

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