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基于DYn-2的拟南芥亚磺酰基组鉴定

DYn-2 Based Identification of Arabidopsis Sulfenomes.

作者信息

Akter Salma, Huang Jingjing, Bodra Nandita, De Smet Barbara, Wahni Khadija, Rombaut Debbie, Pauwels Jarne, Gevaert Kris, Carroll Kate, Van Breusegem Frank, Messens Joris

机构信息

From the Department of Plant Systems Biology, VIB, 9052 Ghent, Belgium; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Structural Biology Research Center, VIB, 1050 Brussels, Belgium; Brussels Center for Redox Biology, 1050 Brussels, Belgium; Structural Biology Brussels, Vrije Universiteit Brussel, 1050 Brussels, Belgium; Faculty of Biological Sciences, University of Dhaka, 1000 Dhaka, Bangladesh.

Structural Biology Research Center, VIB, 1050 Brussels, Belgium; Brussels Center for Redox Biology, 1050 Brussels, Belgium; Structural Biology Brussels, Vrije Universiteit Brussel, 1050 Brussels, Belgium;

出版信息

Mol Cell Proteomics. 2015 May;14(5):1183-200. doi: 10.1074/mcp.M114.046896. Epub 2015 Feb 18.

Abstract

Identifying the sulfenylation state of stressed cells is emerging as a strategic approach for the detection of key reactive oxygen species signaling proteins. Here, we optimized an in vivo trapping method for cysteine sulfenic acids in hydrogen peroxide (H2O2) stressed plant cells using a dimedone based DYn-2 probe. We demonstrated that DYn-2 specifically detects sulfenylation events in an H2O2 dose- and time-dependent way. With mass spectrometry, we identified 226 sulfenylated proteins after H2O2 treatment of Arabidopsis cells, residing in the cytoplasm (123); plastid (68); mitochondria (14); nucleus (10); endoplasmic reticulum, Golgi and plasma membrane (7) and peroxisomes (4). Of these, 123 sulfenylated proteins have never been reported before to undergo cysteine oxidative post-translational modifications in plants. All in all, with this DYn-2 approach, we have identified new sulfenylated proteins, and gave a first glance on the locations of the sulfenomes of Arabidopsis thaliana.

摘要

识别应激细胞的亚磺酰化状态正成为检测关键活性氧信号蛋白的一种策略性方法。在此,我们使用基于双甲酮的DYn-2探针优化了一种用于在过氧化氢(H2O2)胁迫的植物细胞中捕获半胱氨酸亚磺酸的体内方法。我们证明DYn-2以H2O2剂量和时间依赖性方式特异性检测亚磺酰化事件。通过质谱分析,我们在拟南芥细胞经H2O2处理后鉴定出226个亚磺酰化蛋白,它们存在于细胞质(123个)、质体(68个)、线粒体(14个)、细胞核(10个)、内质网、高尔基体和质膜(7个)以及过氧化物酶体(4个)中。其中,有123个亚磺酰化蛋白此前从未被报道在植物中经历过半胱氨酸氧化后修饰。总而言之,通过这种DYn-2方法,我们鉴定出了新的亚磺酰化蛋白,并首次了解了拟南芥亚磺酰化蛋白质组的定位情况。

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