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一种经现场验证的酵母双杂交实验方案,用于鉴定冠状病毒与宿主的蛋白质-蛋白质相互作用。

A field-proven yeast two-hybrid protocol used to identify coronavirus-host protein-protein interactions.

作者信息

Vidalain Pierre-Olivier, Jacob Yves, Hagemeijer Marne C, Jones Louis M, Neveu Grégory, Roussarie Jean-Pierre, Rottier Peter J M, Tangy Frédéric, de Haan Cornelis A M

机构信息

Unité de Génomique Virale etVaccination, Institut Pasteur, Paris, France,

出版信息

Methods Mol Biol. 2015;1282:213-29. doi: 10.1007/978-1-4939-2438-7_18.

DOI:10.1007/978-1-4939-2438-7_18
PMID:25720483
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7121825/
Abstract

Over the last 2 decades, yeast two-hybrid became an invaluable technique to decipher protein-protein interaction networks. In the field of virology, it has proven instrumental to identify virus-host interactions that are involved in viral embezzlement of cellular functions and inhibition of immune mechanisms. Here, we present a yeast two-hybrid protocol that has been used in our laboratory since 2006 to search for cellular partners of more than 300 viral proteins. Our aim was to develop a robust and straightforward pipeline, which minimizes false-positive interactions with a decent coverage of target cDNA libraries, and only requires a minimum of equipment. We also discuss reasons that motivated our technical choices and compromises that had to be made. This protocol has been used to screen most non-structural proteins of murine hepatitis virus (MHV), a member of betacoronavirus genus, against a mouse brain cDNA library. Typical results were obtained and are presented in this report.

摘要

在过去的20年里,酵母双杂交技术成为了解析蛋白质-蛋白质相互作用网络的一项极为重要的技术。在病毒学领域,该技术已被证明有助于识别病毒与宿主之间的相互作用,这些相互作用涉及病毒对细胞功能的利用以及对免疫机制的抑制。在此,我们介绍一种自2006年起就在我们实验室使用的酵母双杂交实验方案,用于寻找300多种病毒蛋白的细胞伴侣。我们的目标是开发一种强大且简便的流程,该流程能将假阳性相互作用降至最低,同时能较好地覆盖目标cDNA文库,并且只需要最少的设备。我们还讨论了促使我们做出技术选择的原因以及不得不做出的权衡。该实验方案已用于针对小鼠脑cDNA文库筛选β冠状病毒属成员小鼠肝炎病毒(MHV)的大多数非结构蛋白。本文报告了获得的典型结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c96/7121825/dda49e79c034/317916_1_En_18_Fig3a_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c96/7121825/97d39d52b28e/317916_1_En_18_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c96/7121825/aa60130c6a73/317916_1_En_18_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c96/7121825/dda49e79c034/317916_1_En_18_Fig3a_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c96/7121825/97d39d52b28e/317916_1_En_18_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c96/7121825/aa60130c6a73/317916_1_En_18_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c96/7121825/dda49e79c034/317916_1_En_18_Fig3a_HTML.jpg

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1
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2
A draft map of the human proteome.人类蛋白质组草图。
Nature. 2014 May 29;509(7502):575-81. doi: 10.1038/nature13302.
3
A comparative approach to characterize the landscape of host-pathogen protein-protein interactions.一种用于表征宿主-病原体蛋白质-蛋白质相互作用格局的比较方法。
NDP52 通过 Rab9 依赖的溶酶体降解途径介导对乙型肝炎病毒感染的抗病毒反应。
Nat Commun. 2023 Dec 19;14(1):8440. doi: 10.1038/s41467-023-44201-2.
4
The Use of Yeast in Biosensing.酵母在生物传感中的应用。
Microorganisms. 2022 Sep 2;10(9):1772. doi: 10.3390/microorganisms10091772.
5
Comparative Virus-Host Protein Interactions of the Bluetongue Virus NS4 Virulence Factor.比较蓝舌病病毒 NS4 毒力因子的病毒-宿主蛋白相互作用。
Viruses. 2022 Jan 19;14(2):182. doi: 10.3390/v14020182.
6
Depletion of TAX1BP1 Amplifies Innate Immune Responses during Respiratory Syncytial Virus Infection.TAX1BP1 耗竭增强呼吸道合胞病毒感染期间固有免疫反应。
J Virol. 2021 Oct 27;95(22):e0091221. doi: 10.1128/JVI.00912-21. Epub 2021 Aug 25.
7
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PLoS One. 2021 Feb 17;16(2):e0246901. doi: 10.1371/journal.pone.0246901. eCollection 2021.
8
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RNA Biol. 2021 May;18(5):732-744. doi: 10.1080/15476286.2020.1868754. Epub 2021 Jan 18.
9
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4
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5
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6
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