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配体对磺基转移酶热稳定性的影响:分子动力学模拟研究

The effect of ligands on the thermal stability of sulfotransferases: a molecular dynamics simulation study.

作者信息

Zhang Pu-pu, Zhao Li, Long Shi-yang, Tian Pu

机构信息

School of Life Sciences, Jilin University, Changchun, China.

出版信息

J Mol Model. 2015 Apr;21(4):72. doi: 10.1007/s00894-015-2625-1. Epub 2015 Mar 8.

Abstract

Human cytosolic sulfotransferases (hSULTs) are important phase II metabolic enzymes. They catalyze transfer of the sulfuryl-group (-SO3) from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to the hydroxyl or primary amine moieties of a large number of endogenous and xenobiotic substrates. Broad selectivity and specificity of binding and activity within the sulfortransferases family could be detected by thermal denaturation assays, which have been made more and more suitable for high throughput screening based on recent technical advances. Here molecular dynamics simulations were used to explore the effect of the cofactor (PAPS) and substrate (LCA) on the thermal stability of the enzyme. It was found that the apo-enzyme unfolded fastest upon heating. The holo-enzyme with bound substrate LCA unfolded slowest. This thermo-denaturation order is consistent with that observed in experiments. Further it was found that the cofactor and substrate will pronouncedly increase the thermal stability of the active pocket regions that interact directly with the ligands. In addition, cofactor and substrate show noticeable synergy effect on the thermal stability of the enzyme.

摘要

人胞质磺基转移酶(hSULTs)是重要的Ⅱ相代谢酶。它们催化3'-磷酸腺苷5'-磷酸硫酸酯(PAPS)中的磺酰基(-SO3)转移至大量内源性和外源性底物的羟基或伯胺基团。磺基转移酶家族内结合和活性的广泛选择性和特异性可通过热变性分析检测,基于近期的技术进展,该分析已越来越适用于高通量筛选。在此,利用分子动力学模拟来探究辅因子(PAPS)和底物(LCA)对该酶热稳定性的影响。结果发现,无配体酶在加热时展开最快。结合底物LCA的全酶展开最慢。这种热变性顺序与实验中观察到的一致。此外还发现,辅因子和底物会显著提高与配体直接相互作用的活性口袋区域的热稳定性。另外,辅因子和底物对该酶的热稳定性表现出明显的协同效应。

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