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碳水化合物的溶液构象:借助建模的核磁共振方法的研究视角

Solution conformation of carbohydrates: a view by using NMR assisted by modeling.

作者信息

Díaz Dolores, Canales-Mayordomo Angeles, Cañada F Javier, Jiménez-Barbero Jesús

机构信息

Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, Spain.

出版信息

Methods Mol Biol. 2015;1273:261-87. doi: 10.1007/978-1-4939-2343-4_19.

Abstract

Structural elucidation of complex carbohydrates in solution is not a trivial task. From the NMR view point, the limited chemical shift dispersion of sugar NMR spectra demands the combination of a variety of NMR techniques as well as the employment of molecular modeling methods. Herein, a general protocol for assignment of resonances and determination of inter-proton distances within the saccharides by homonuclear and heteronuclear experiments (i.e., (1)H and (13)C) is described. In addition, several computational tools and procedures for getting a final ensemble of geometries that represent the structure in solution are presented.

摘要

溶液中复杂碳水化合物的结构解析并非易事。从核磁共振(NMR)的角度来看,糖NMR谱有限的化学位移分散性要求结合多种NMR技术以及采用分子建模方法。本文描述了一种通过同核和异核实验(即¹H和¹³C)对糖类内共振进行归属和测定质子间距离的通用方案。此外,还介绍了几种用于获得代表溶液中结构的最终几何结构集合的计算工具和程序。

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