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拟南芥中甘油脂生物合成基因的昼夜和昼夜节律表达谱

Diurnal and circadian expression profiles of glycerolipid biosynthetic genes in Arabidopsis.

作者信息

Nakamura Yuki, Andrés Fernando, Kanehara Kazue, Liu Yu-chi, Coupland George, Dörmann Peter

机构信息

a Institute of Plant and Microbial Biology; Academia Sinica; Nankang, Taipei, Taiwan.

出版信息

Plant Signal Behav. 2014;9(9):e29715. doi: 10.4161/psb.29715.

Abstract

Glycerolipid composition in plant membranes oscillates in response to diurnal change. However, its functional significance remained unclear. A recent discovery that Arabidopsis florigen FT binds diurnally oscillating phosphatidylcholine molecules to promote flowering suggests that diurnal oscillation of glycerolipid composition is an important input in flowering time control. Taking advantage of public microarray data, we globally analyzed the expression pattern of glycerolipid biosynthetic genes in Arabidopsis under long-day, short-day, and continuous light conditions. The results revealed that 12 genes associated with glycerolipid metabolism showed significant oscillatory profiles. Interestingly, expression of most of these genes followed circadian profiles, suggesting that glycerolipid biosynthesis is partially under clock regulation. The oscillating expression profile of one representative gene, PECT1, was analyzed in detail. Expression of PECT1 showed a circadian pattern highly correlated with that of the clock-regulated gene GIGANTEA. Thus, our study suggests that a considerable number of glycerolipid biosynthetic genes are under circadian control.

摘要

植物膜中的甘油脂组成会随着昼夜变化而波动。然而,其功能意义仍不清楚。最近的一项发现表明,拟南芥成花素FT与昼夜振荡的磷脂酰胆碱分子结合以促进开花,这表明甘油脂组成的昼夜振荡是开花时间控制的重要输入因素。利用公开的微阵列数据,我们全面分析了拟南芥在长日照、短日照和连续光照条件下甘油脂生物合成基因的表达模式。结果显示,12个与甘油脂代谢相关的基因呈现出显著的振荡图谱。有趣的是,这些基因中的大多数表达遵循昼夜节律,这表明甘油脂生物合成部分受生物钟调控。我们详细分析了一个代表性基因PECT1的振荡表达图谱。PECT1的表达呈现出与生物钟调控基因GIGANTEA高度相关的昼夜模式。因此,我们的研究表明,相当数量的甘油脂生物合成基因受昼夜节律控制。

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