Fukuda Yoshiyuki, Laugks Ulrike, Lučić Vladan, Baumeister Wolfgang, Danev Radostin
Department of Molecular Structural Biology, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, D-82152 Martinsried, Germany.
Department of Molecular Structural Biology, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, D-82152 Martinsried, Germany.
J Struct Biol. 2015 May;190(2):143-54. doi: 10.1016/j.jsb.2015.03.004. Epub 2015 Mar 12.
Electron cryotomography provides a means of studying the three dimensional structure of pleomorphic objects, such as organelles or cells, with a resolution of 1-3nm. A limitation in the study of radiation sensitive biological samples is the low signal-to-noise ratio of the tomograms which may obscure fine details. To overcome this limitation, the recently developed Volta phase plate (VPP) was applied in electron cryotomographic studies of a wide range of cellular structures, from magnetotactic bacteria to primary cultured neurons. The results show that the VPP improves contrast significantly and consequently the signal-to-noise ratio of the tomograms, moreover it avoids disturbing fringing artifacts typical for Zernike phase plates. The contrast improvement provided by the VPP was also confirmed in projection images of relatively thick (∼400nm) samples. In order to investigate the respective contributions of the VPP and the energy filter, images acquired with different combinations of the two were compared. Zero-loss energy filtering reduced the background noise in thicker areas of the sample and improved the contrast of features such as poly-β-hydroxybutyrate granules in magnetotactic bacteria, whereas the VPP provided an overall contrast improvement for all sample areas. After 3D reconstruction, tomograms acquired with the combination of a VPP and an energy filter showed structural features in neuronal processes with outstanding clarity. We also show that the VPP can be combined with focused ion beam milling to examine structures embedded deeply inside cells. Thus, we expect that VPP will become a standard element of the electron cryotomography workflow.
电子冷冻断层扫描提供了一种研究诸如细胞器或细胞等多形物体三维结构的方法,分辨率可达1 - 3纳米。辐射敏感生物样品研究中的一个限制是断层扫描图像的低信噪比,这可能会掩盖精细细节。为克服这一限制,最近开发的伏打相位板(VPP)被应用于从趋磁细菌到原代培养神经元等多种细胞结构的电子冷冻断层扫描研究中。结果表明,VPP显著提高了对比度,从而提高了断层扫描图像的信噪比,此外,它还避免了泽尼克相位板典型的干扰条纹伪影。VPP提供的对比度改善在相对较厚(约400纳米)样品的投影图像中也得到了证实。为了研究VPP和能量过滤器各自的作用,对用两者不同组合获取的图像进行了比较。零损失能量过滤降低了样品较厚区域的背景噪声,并改善了趋磁细菌中多聚-β-羟基丁酸酯颗粒等特征的对比度,而VPP为所有样品区域提供了整体对比度改善。三维重建后,用VPP和能量过滤器组合获取的断层扫描图像清晰地显示了神经元突起中的结构特征。我们还表明,VPP可与聚焦离子束铣削相结合,以检查细胞内部深处的结构。因此,我们预计VPP将成为电子冷冻断层扫描工作流程的标准元件。