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黄色黏球菌的肌动蛋白细胞骨架蛋白BacM形成了一种可能由疏水相互作用介导的延伸β-折叠结构。

The bactofilin cytoskeleton protein BacM of Myxococcus xanthus forms an extended β-sheet structure likely mediated by hydrophobic interactions.

作者信息

Zuckerman David M, Boucher Lauren E, Xie Kefang, Engelhardt Harald, Bosch Jürgen, Hoiczyk Egbert

机构信息

W. Harry Feinstone Department of Molecular Microbiology and Immunology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.

Department of Biochemistry and Molecular Biology, Johns Hopkins Bloomberg School of Public Health and Johns Hopkins Malaria Research Institute, Baltimore, Maryland, United States of America.

出版信息

PLoS One. 2015 Mar 24;10(3):e0121074. doi: 10.1371/journal.pone.0121074. eCollection 2015.

Abstract

Bactofilins are novel cytoskeleton proteins that are widespread in Gram-negative bacteria. Myxococcus xanthus, an important predatory soil bacterium, possesses four bactofilins of which one, BacM (Mxan_7475) plays an important role in cell shape maintenance. Electron and fluorescence light microscopy, as well as studies using over-expressed, purified BacM, indicate that this protein polymerizes in vivo and in vitro into ~3 nm wide filaments that further associate into higher ordered fibers of about 10 nm. Here we use a multipronged approach combining secondary structure determination, molecular modeling, biochemistry, and genetics to identify and characterize critical molecular elements that enable BacM to polymerize. Our results indicate that the bactofilin-determining domain DUF583 folds into an extended β-sheet structure, and we hypothesize a left-handed β-helix with polymerization into 3 nm filaments primarily via patches of hydrophobic amino acid residues. These patches form the interface allowing head-to-tail polymerization during filament formation. Biochemical analyses of these processes show that folding and polymerization occur across a wide variety of conditions and even in the presence of chaotropic agents such as one molar urea. Together, these data suggest that bactofilins are comprised of a structure unique to cytoskeleton proteins, which enables robust polymerization.

摘要

细菌肌动蛋白是广泛存在于革兰氏阴性菌中的新型细胞骨架蛋白。黄单胞菌是一种重要的捕食性土壤细菌,它拥有四种细菌肌动蛋白,其中一种名为BacM(Mxan_7475)在维持细胞形态方面发挥着重要作用。电子显微镜和荧光显微镜观察,以及对过表达、纯化的BacM的研究表明,这种蛋白在体内和体外都能聚合成约3纳米宽的细丝,这些细丝进一步组装成约10纳米的高阶纤维。在这里,我们采用多管齐下的方法,结合二级结构测定、分子建模、生物化学和遗传学来鉴定和表征使BacM能够聚合的关键分子元件。我们的结果表明,决定细菌肌动蛋白的结构域DUF583折叠成一个延伸的β-折叠结构,我们推测它是一个左手β-螺旋,主要通过疏水性氨基酸残基区域聚合成3纳米的细丝。这些区域形成了界面,允许在细丝形成过程中进行头对尾的聚合。对这些过程的生化分析表明,折叠和聚合在各种条件下甚至在诸如1摩尔尿素等变性剂存在的情况下都会发生。总之,这些数据表明细菌肌动蛋白由细胞骨架蛋白特有的结构组成,这使得它能够进行强大的聚合作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32e6/4372379/1ca38cf88e49/pone.0121074.g001.jpg

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