Institute for Research in Cancer & Ageing Nice (IRCAN), Equipe Labellisée Ligue Contre le Cancer, INSERM U1081, CNRS UMR 7284, University of Nice-Sophia Antipolis, Faculty of Medicine, 28 Ave de Valombrose, 06107 Nice, France; Max Planck Institute for Immunobiology and Epigenetics (MPI-IE), Stubeweg 51, 7108 Freiburg, Germany.
C3M, INSERM UMR 1065, University of Nice Sophia-Antipolis, 151, Route de St-Antoine-de-Ginestière, 06204 Nice, France.
Semin Immunol. 2015 Feb;27(1):33-43. doi: 10.1016/j.smim.2015.02.004. Epub 2015 Mar 24.
One of the best-characterized and biologically important gene expression programmes in myeloid cells is their response to pro-inflammatory stimuli. Macrophages and DCs in particular are key mediators of immune responses, and are widely-used as prototypes to understand and define the determinants of specific and inducible gene expression. In this review we summarize advances and concepts which have been made towards the understanding of inducible gene expression, with a particular focus on insights gained using the myeloid system as a model. We discuss the emerging concept of layered control of gene regulation and cell identity by different functional classes of transcription factors; and examine recent progress to understanding the molecular processes involved, including the involvement of nucleosome positioning, chromatin modifications, and nuclear architecture. We also address the exciting but less-well understood role of non-coding RNAs in controlling specific gene expression programmes in myeloid and other cell-types.
髓系细胞中特征最明显且具有重要生物学意义的基因表达程序之一是它们对促炎刺激的反应。巨噬细胞和树突状细胞(DC)是免疫反应的关键介质,它们被广泛用作原型,以了解和定义特定和诱导基因表达的决定因素。在这篇综述中,我们总结了在理解诱导基因表达方面取得的进展和概念,特别关注了使用髓系系统作为模型所获得的见解。我们讨论了不同功能类转录因子对基因调控和细胞身份的分层控制的新兴概念;并研究了理解所涉及的分子过程的最新进展,包括核小体定位、染色质修饰和核结构的参与。我们还探讨了非编码 RNA 在控制髓系和其他细胞类型中特定基因表达程序方面令人兴奋但了解较少的作用。