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利用血液转录组学评估免疫状态及其对全球健康的潜在影响。

Assessment of immune status using blood transcriptomics and potential implications for global health.

机构信息

Sidra Medical and Research Center, Doha, Qatar.

出版信息

Semin Immunol. 2015 Feb;27(1):58-66. doi: 10.1016/j.smim.2015.03.002. Epub 2015 Mar 29.

Abstract

The immune system plays a key role in health maintenance and pathogenesis of a wide range of diseases. Leukocytes that are present in the blood convey valuable information about the status of the immune system. Blood transcriptomics, which consists in profiling blood transcript abundance on genome-wide scales, has gained in popularity over the past several years. Indeed, practicality and simplicity largely makes up for what this approach may lack in terms of cell population-level resolution. An extensive survey of the literature reveals increasingly widespread use across virtually all fields of medicine as well as across a number of different animal species, including model organisms but also animals of economical importance. Dissemination across such a wide range of disciplines holds the promise of adding a new perspective, breadth or context, to the considerable depth afforded by whole genome profiling of blood transcript abundance. Indeed, it is only through such contextualization that a truly global perspective will be gained from the use of systems approaches. Also discussed are opportunities that may arise for the fields of immunology and medicine from using blood transcriptomics as a common denominator for developing interactions and cooperation across fields of research that have traditionally been and largely remain compartmentalized. Finally, an argument is made for building immunology research capacity using blood transcriptomics platforms in low-resource and high-disease burden settings.

摘要

免疫系统在维持健康和多种疾病的发病机制中起着关键作用。存在于血液中的白细胞提供了有关免疫系统状况的有价值信息。血液转录组学是在全基因组范围内对血液转录丰度进行分析的一种方法,近年来越来越受到关注。实际上,这种方法的实用性和简单性在一定程度上弥补了其在细胞群体水平分辨率方面的不足。对文献的广泛调查表明,这种方法几乎在医学的所有领域以及许多不同的动物物种中得到了越来越广泛的应用,包括模式生物,还有具有经济重要性的动物。在如此广泛的学科中传播有望为血液转录丰度的全基因组分析提供的深度增添新的视角、广度或背景。事实上,只有通过这种语境化,才能从系统方法的使用中获得真正的全球视角。还讨论了免疫学和医学领域可能从血液转录组学中获得的机会,将其作为在传统上和在很大程度上仍然是分隔的研究领域中发展相互作用和合作的共同基础。最后,本文提出了在资源匮乏和疾病负担高的环境中利用血液转录组学平台建立免疫学研究能力的观点。

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