Zhang Suhua, Bian Yingnan, Tian Huaizhou, Wang Zheng, Hu Zhen, Li Chengtao
Shanghai Key Laboratory of Forensic Medicine, Institute of Forensic Sciences, Ministry of Justice, Shanghai 200063, PR China; State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Sciences, Fudan University, Shanghai 200433, PR China.
Shanghai Key Laboratory of Forensic Medicine, Institute of Forensic Sciences, Ministry of Justice, Shanghai 200063, PR China.
Forensic Sci Int Genet. 2015 Jul;17:61-69. doi: 10.1016/j.fsigen.2015.03.008. Epub 2015 Mar 14.
In this study, a new STR 25-plex typing system, including 23 autosomal STRs (D1S1656, D2S1338, D2S441, D3S1358, D5S818, D6S1043, D7S820, D8S1179, D10S1248, D12S391, D13S317, D16S539, D18S51, D19S433, D21S11, D22S1045, CSF1PO, FGA, Penta D, Penta E, TH01, TPOX, vWA) and a Y-STR locus of DYS391 and amelogenin, was developed. The included 24 STRs belonged to the main international DNA databases (CODIS, ISSL, ESS-extended, UCL, GCL and NCIDD) except D6S1043 (specially chosen for Chinese population). Developmental validation indicated that the STR 25-plex typing system was reproducible, accurate, sensitive and robust. The sensitivity testing of the system was such that a full profile was obtainable even with 125pg of human DNA. Specificity testing was demonstrated by the lack of cross-reactivity with a variety of commonly encountered animal species and microbial pool. For the stability testing, full profiles can been obtained with humic acid concentration≤60ng/μL and hematin<500μM. Also, this multiplex system is suitable for mixture study. All of the minor alleles were called for ratios of 1:1, 1:3 and 3:1 of the mixture with the system. In addition, the whole PCR amplification can finish within 1h, making the system suitable for fast-detection. For the forensic evaluation of the multiplex system, 23 autosomal STRs included followed the Hardy-Weinberg equilibrium. A total of 268 alleles were detected for the 23 autosomal STR loci among 200 individuals. Since 23 autosomal STRs were independent from each other, CMECduo was 0.99999916563607 and CMECtri was 0.99999999986525. All the forensic efficiency parameters demonstrated that this multiplex system is highly polymorphic and informative in the Han population of China.
在本研究中,开发了一种新的STR 25重分型系统,包括23个常染色体STR(D1S1656、D2S1338、D2S441、D3S1358、D5S818、D6S1043、D7S820、D8S1179、D10S1248、D12S391、D13S317、D16S539、D18S51、D19S433、D21S11、D22S1045、CSF1PO、FGA、Penta D、Penta E、TH01、TPOX、vWA)以及一个Y染色体STR位点DYS391和牙釉蛋白基因。除D6S1043(专为中国人群选择)外,所包含的24个STR均属于主要的国际DNA数据库(CODIS、ISSL、ESS扩展库、UCL、GCL和NCIDD)。开发验证表明,该STR 25重分型系统具有可重复性、准确性、灵敏性和稳健性。该系统的灵敏度测试表明,即使使用125pg人类DNA也可获得完整图谱。通过与多种常见动物物种和微生物库缺乏交叉反应证明了特异性测试。对于稳定性测试,当腐殖酸浓度≤60ng/μL且血红素<500μM时可获得完整图谱。此外,该多重系统适用于混合样本研究。该系统可识别1:1、1:3和3:1混合比例中的所有次要等位基因。此外,整个PCR扩增可在1小时内完成,使该系统适用于快速检测。对于该多重系统的法医学评估,所包含的23个常染色体STR符合哈迪-温伯格平衡。在200名个体中,23个常染色体STR位点共检测到268个等位基因。由于23个常染色体STR相互独立,累积个体识别率(CMECduo)为0.99999916563607,累积三联体识别率(CMECtri)为0.99999999986525。所有法医学效能参数均表明,该多重系统在中国汉族人群中具有高度多态性和信息性。