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基于三维反应性分子溶剂化理论并结合偏摩尔体积校正的正辛醇-水分配系数

Octanol-Water Partition Coefficient from 3D-RISM-KH Molecular Theory of Solvation with Partial Molar Volume Correction.

作者信息

Huang WenJuan, Blinov Nikolay, Kovalenko Andriy

机构信息

†Department of Mechanical Engineering, University of Alberta, Edmonton, Alberta Canada.

‡National Institute for Nanotechnology, National Research Council of Canada, Edmonton, Alberta Canada.

出版信息

J Phys Chem B. 2015 Apr 30;119(17):5588-97. doi: 10.1021/acs.jpcb.5b01291. Epub 2015 Apr 15.

Abstract

The octanol-water partition coefficient is an important physical-chemical characteristic widely used to describe hydrophobic/hydrophilic properties of chemical compounds. The partition coefficient is related to the transfer free energy of a compound from water to octanol. Here, we introduce a new protocol for prediction of the partition coefficient based on the statistical-mechanical, 3D-RISM-KH molecular theory of solvation. It was shown recently that with the compound-solvent correlation functions obtained from the 3D-RISM-KH molecular theory of solvation, the free energy functional supplemented with the correction linearly related to the partial molar volume obtained from the Kirkwood-Buff/3D-RISM theory, also called the "universal correction" (UC), provides accurate prediction of the hydration free energy of small compounds, compared to explicit solvent molecular dynamics [ Palmer , D. S. ; J. Phys.: Condens. Matter 2010 , 22 , 492101 ]. Here we report that with the UC reparametrized accordingly this theory also provides an excellent agreement with the experimental data for the solvation free energy in nonpolar solvent (1-octanol) and so accurately predicts the octanol-water partition coefficient. The performance of the Kovalenko-Hirata (KH) and Gaussian fluctuation (GF) functionals of the solvation free energy, with and without UC, is tested on a large library of small compounds with diverse functional groups. The best agreement with the experimental data for octanol-water partition coefficients is obtained with the KH-UC solvation free energy functional.

摘要

正辛醇 - 水分配系数是一种重要的物理化学特性,广泛用于描述化合物的疏水/亲水性质。该分配系数与化合物从水转移到正辛醇的自由能相关。在此,我们基于统计力学的3D - RISM - KH溶剂化分子理论,介绍一种预测分配系数的新方法。最近的研究表明,利用从3D - RISM - KH溶剂化分子理论获得的化合物 - 溶剂相关函数,补充了与从柯克伍德 - 布夫/3D - RISM理论获得的偏摩尔体积线性相关的校正项(也称为“通用校正”,UC)的自由能泛函,与显式溶剂分子动力学相比,能准确预测小分子的水化自由能[帕尔默,D. S.;《物理:凝聚态物质》2010年,22卷,492101]。在此我们报告,通过相应地重新参数化UC,该理论还与非极性溶剂(正辛醇)中溶剂化自由能的实验数据高度吻合,从而准确预测正辛醇 - 水分配系数。在一个包含各种官能团的小分子大数据库上,测试了有无UC时溶剂化自由能的科瓦连科 - 平田(KH)和高斯涨落(GF)泛函的性能。对于正辛醇 - 水分配系数,使用KH - UC溶剂化自由能泛函能获得与实验数据的最佳吻合。

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