Huang WenJuan, Blinov Nikolay, Kovalenko Andriy
†Department of Mechanical Engineering, University of Alberta, Edmonton, Alberta Canada.
‡National Institute for Nanotechnology, National Research Council of Canada, Edmonton, Alberta Canada.
J Phys Chem B. 2015 Apr 30;119(17):5588-97. doi: 10.1021/acs.jpcb.5b01291. Epub 2015 Apr 15.
The octanol-water partition coefficient is an important physical-chemical characteristic widely used to describe hydrophobic/hydrophilic properties of chemical compounds. The partition coefficient is related to the transfer free energy of a compound from water to octanol. Here, we introduce a new protocol for prediction of the partition coefficient based on the statistical-mechanical, 3D-RISM-KH molecular theory of solvation. It was shown recently that with the compound-solvent correlation functions obtained from the 3D-RISM-KH molecular theory of solvation, the free energy functional supplemented with the correction linearly related to the partial molar volume obtained from the Kirkwood-Buff/3D-RISM theory, also called the "universal correction" (UC), provides accurate prediction of the hydration free energy of small compounds, compared to explicit solvent molecular dynamics [ Palmer , D. S. ; J. Phys.: Condens. Matter 2010 , 22 , 492101 ]. Here we report that with the UC reparametrized accordingly this theory also provides an excellent agreement with the experimental data for the solvation free energy in nonpolar solvent (1-octanol) and so accurately predicts the octanol-water partition coefficient. The performance of the Kovalenko-Hirata (KH) and Gaussian fluctuation (GF) functionals of the solvation free energy, with and without UC, is tested on a large library of small compounds with diverse functional groups. The best agreement with the experimental data for octanol-water partition coefficients is obtained with the KH-UC solvation free energy functional.
正辛醇 - 水分配系数是一种重要的物理化学特性,广泛用于描述化合物的疏水/亲水性质。该分配系数与化合物从水转移到正辛醇的自由能相关。在此,我们基于统计力学的3D - RISM - KH溶剂化分子理论,介绍一种预测分配系数的新方法。最近的研究表明,利用从3D - RISM - KH溶剂化分子理论获得的化合物 - 溶剂相关函数,补充了与从柯克伍德 - 布夫/3D - RISM理论获得的偏摩尔体积线性相关的校正项(也称为“通用校正”,UC)的自由能泛函,与显式溶剂分子动力学相比,能准确预测小分子的水化自由能[帕尔默,D. S.;《物理:凝聚态物质》2010年,22卷,492101]。在此我们报告,通过相应地重新参数化UC,该理论还与非极性溶剂(正辛醇)中溶剂化自由能的实验数据高度吻合,从而准确预测正辛醇 - 水分配系数。在一个包含各种官能团的小分子大数据库上,测试了有无UC时溶剂化自由能的科瓦连科 - 平田(KH)和高斯涨落(GF)泛函的性能。对于正辛醇 - 水分配系数,使用KH - UC溶剂化自由能泛函能获得与实验数据的最佳吻合。