Sippel Katherine H, Quiocho Florante A
Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, 77030.
Protein Sci. 2015 Jul;24(7):1040-6. doi: 10.1002/pro.2685. Epub 2015 May 1.
Ion-dipole interactions in biological macromolecules are formed between atomic or molecular ions and neutral protein dipolar groups through either hydrogen bond or coordination. Since their discovery 30 years ago, these interactions have proven to be a frequent occurrence in protein structures, appearing in everything from transporters and ion channels to enzyme active sites to protein-protein interfaces. However, their significance and roles in protein functions are largely underappreciated. We performed PDB data mining to identify a sampling of proteins that possess these interactions. In this review, we will define the ion-dipole interaction and discuss several prominent examples of their functional roles in nature.
生物大分子中的离子-偶极相互作用是通过氢键或配位作用在原子或分子离子与中性蛋白质偶极基团之间形成的。自30年前被发现以来,这些相互作用已被证明在蛋白质结构中频繁出现,从转运蛋白、离子通道到酶活性位点再到蛋白质-蛋白质界面,无处不在。然而,它们在蛋白质功能中的重要性和作用在很大程度上未得到充分认识。我们进行了蛋白质数据银行(PDB)数据挖掘,以识别具有这些相互作用的蛋白质样本。在本综述中,我们将定义离子-偶极相互作用,并讨论它们在自然界中功能作用的几个突出例子。