• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

组氨酸修饰的增强型绿色荧光蛋白(EGFP)的荧光被铜(II)离子有效淬灭。第二部分。分子决定因素。

Fluorescence of a Histidine-Modified Enhanced Green Fluorescent Protein (EGFP) Effectively Quenched by Copper(II) Ions. Part II. Molecular Determinants.

作者信息

Péterffy Judit Petres, Szabó Mária, Szilágyi László, Lányi Szabolcs, Ábrahám Beáta

机构信息

Department of Inorganic Substances Technology and Environment, Protection, "Politechnica" University of Bucharest, Polizu street No. 1-7, 011061, Bucharest, Romania,

出版信息

J Fluoresc. 2015 Jul;25(4):871-83. doi: 10.1007/s10895-015-1567-4. Epub 2015 Apr 19.

DOI:10.1007/s10895-015-1567-4
PMID:25893929
Abstract

The histidine-modified EGFP was characterized as a sensing element that preferentially binds nanomolar concentrations of Cu(2+) in a reversible manner (Kd = 15 nM). This research aims to determine the causes of nanomolar-affinity of this mutant by investigating significant structural and energetic alterations of the chromophore in the presence of different copper ion concentrations. In order to reveal the unknown parts of the quenching mechanism we have elaborated a specific approach that combines theoretical and experimental techniques. The theoretical experiment included the modeling of potential distortions of the chromophores and the corresponding changes in energy using quantum mechanical calculations. Differences between the modeled energy profiles of planar and distorted conformations represented the energies of activation for the chromophore distortions. We found that some values of the experimental activation energies, which were derived from fluorescence lifetime decay analysis (ex: 470 nm, em: 507 nm), were consistent with the theoretical ones. Thus, it has been revealed similarity between the theoretical activation energy (50 kJmol(-1)) for 40° phenolate-ring distortion and the experimental activation energy (52.17 kJmol(-1)) required for histidine-modified EGFP saturation with copper. This chromophore conformation was further investigated and it has been found that the large decrease in fluorescence emission is attributed to the significant charge transfer over the molecule which triggers proton transfer thereby neutralizing the cromophore.

摘要

组氨酸修饰的增强型绿色荧光蛋白(EGFP)被表征为一种传感元件,它以可逆方式优先结合纳摩尔浓度的Cu(2+)(解离常数Kd = 15 nM)。本研究旨在通过研究在不同铜离子浓度下生色团显著的结构和能量变化,来确定该突变体具有纳摩尔亲和力的原因。为了揭示猝灭机制中未知的部分,我们精心设计了一种结合理论和实验技术的特定方法。理论实验包括使用量子力学计算对生色团的潜在畸变及其相应的能量变化进行建模。平面构象和畸变构象的建模能量分布之间的差异代表了生色团畸变的活化能。我们发现,通过荧光寿命衰减分析得出的一些实验活化能值(例如:激发波长470 nm,发射波长507 nm)与理论值一致。因此,已揭示出40°酚盐环畸变的理论活化能(50 kJmol(-1))与组氨酸修饰的EGFP被铜饱和所需的实验活化能(52.17 kJmol(-1))之间的相似性。对这种生色团构象进行了进一步研究,发现荧光发射的大幅下降归因于分子上显著的电荷转移,这引发了质子转移,从而使生色团中和。

相似文献

1
Fluorescence of a Histidine-Modified Enhanced Green Fluorescent Protein (EGFP) Effectively Quenched by Copper(II) Ions. Part II. Molecular Determinants.组氨酸修饰的增强型绿色荧光蛋白(EGFP)的荧光被铜(II)离子有效淬灭。第二部分。分子决定因素。
J Fluoresc. 2015 Jul;25(4):871-83. doi: 10.1007/s10895-015-1567-4. Epub 2015 Apr 19.
2
Fluorescence of a histidine-modified enhanced green fluorescent protein (EGFP) effectively quenched by copper(II) ions.组氨酸修饰的增强型绿色荧光蛋白(EGFP)的荧光被铜(II)离子有效猝灭。
J Fluoresc. 2013 Mar;23(2):273-81. doi: 10.1007/s10895-012-1145-y. Epub 2012 Nov 6.
3
Copper sensing based on the far-red fluorescent protein, HcRed, from Heteractis crispa.基于来自卷曲异辐海葵的远红荧光蛋白HcRed的铜传感。
Anal Biochem. 2007 Nov 1;370(1):60-7. doi: 10.1016/j.ab.2007.05.018. Epub 2007 May 26.
4
Resurfaced fluorescent protein as a sensing platform for label-free detection of copper(II) ion and acetylcholinesterase activity.荧光蛋白再激活作为无标记检测铜(II)离子和乙酰胆碱酯酶活性的传感平台。
Anal Chem. 2015 Feb 3;87(3):1974-80. doi: 10.1021/ac504390e. Epub 2015 Jan 15.
5
X-ray structure of Cerulean GFP: a tryptophan-based chromophore useful for fluorescence lifetime imaging.天蓝绿色荧光蛋白的X射线结构:一种基于色氨酸的发色团,可用于荧光寿命成像。
Biochemistry. 2007 Sep 4;46(35):9865-73. doi: 10.1021/bi602664c. Epub 2007 Aug 8.
6
An alternate proton acceptor for excited-state proton transfer in green fluorescent protein: rewiring GFP.绿色荧光蛋白中激发态质子转移的另一种质子受体:重新构建绿色荧光蛋白。
J Am Chem Soc. 2008 Jan 30;130(4):1227-35. doi: 10.1021/ja0754507. Epub 2008 Jan 8.
7
Excited-State Proton-Transfer-Induced Trapping Enhances the Fluorescence Emission of a Locked GFP Chromophore.激发态质子转移诱导的捕获增强了锁定型绿色荧光蛋白发色团的荧光发射。
J Chem Theory Comput. 2016 Feb 9;12(2):753-64. doi: 10.1021/acs.jctc.5b00894. Epub 2016 Jan 15.
8
A genetically encoded copper(I) sensor based on engineered structural distortion of EGFP.基于 EGFP 工程结构扭曲的基因编码铜(I)传感器。
Chem Commun (Camb). 2012 Apr 21;48(32):3890-2. doi: 10.1039/c2cc30531c. Epub 2012 Mar 14.
9
Collapse and recovery of green fluorescent protein chromophore emission through topological effects.通过拓扑效应实现绿色荧光蛋白生色团发射的崩塌和恢复。
Acc Chem Res. 2012 Feb 21;45(2):171-81. doi: 10.1021/ar2000925. Epub 2011 Aug 24.
10
Ultrafast proton shuttling in Psammocora cyan fluorescent protein.蓝珊瑚钙蛋白中超快质子穿梭。
J Phys Chem B. 2013 Sep 26;117(38):11134-43. doi: 10.1021/jp401114e. Epub 2013 Apr 19.

引用本文的文献

1
Metal-Induced Fluorescence Quenching of Photoconvertible Fluorescent Protein DendFP.金属诱导光转化荧光蛋白 DendFP 的荧光猝灭。
Molecules. 2022 May 3;27(9):2922. doi: 10.3390/molecules27092922.
2
Spectroscopic and Structural Analysis of Cu-Induced Fluorescence Quenching of ZsYellow.Cu 诱导 ZsYellow 荧光猝灭的光谱和结构分析。
Biosensors (Basel). 2020 Mar 23;10(3):29. doi: 10.3390/bios10030029.
3
Silica microspheres functionalized with the iminodiacetic acid/copper(II) complex as a peroxidase mimic for use in metal affinity chromatography-based colorimetric determination of histidine-tagged proteins.

本文引用的文献

1
Potential Energy Landscape of the Electronic States of the GFP Chromophore in Different Protonation Forms: Electronic Transition Energies and Conical Intersections.不同质子化形式下绿色荧光蛋白发色团电子态的势能面:电子跃迁能量与锥形交叉点
J Chem Theory Comput. 2010 Aug 10;6(8):2377-87. doi: 10.1021/ct100227k. Epub 2010 Jul 20.
2
Quantum Chemical Benchmark Studies of the Electronic Properties of the Green Fluorescent Protein Chromophore. 1. Electronically Excited and Ionized States of the Anionic Chromophore in the Gas Phase.绿色荧光蛋白发色团电子性质的量子化学基准研究。1. 气相中阴离子发色团的电子激发态和电离态。
J Chem Theory Comput. 2009 Jul 14;5(7):1895-906. doi: 10.1021/ct900143j. Epub 2009 Jun 25.
3
用亚氨基二乙酸/铜(II)配合物功能化的硅微球作为过氧化物酶模拟物,用于基于金属亲和层析的组氨酸标记蛋白比色测定。
Mikrochim Acta. 2020 Jan 12;187(2):121. doi: 10.1007/s00604-019-4087-0.
Communication: Autodetachment versus internal conversion from the S1 state of the isolated GFP chromophore anion.
通讯:从孤立 GFP 生色团阴离子的 S1 态的自动离域与内转换。
J Chem Phys. 2013 Aug 21;139(7):071104. doi: 10.1063/1.4819078.
4
Effects of hydrogen bonding on internal conversion of GFP-like chromophores. II. The meta-amino systems.氢键对 GFP 类生色团内转换的影响。II. 间氨基体系。
J Phys Chem B. 2013 Mar 7;117(9):2705-16. doi: 10.1021/jp3093397. Epub 2013 Feb 25.
5
Effects of hydrogen bonding on internal conversion of GFP-like chromophores. I. The para-amino systems.氢键对 GFP 类似发色团内转换的影响。I. 对氨基系统。
J Phys Chem B. 2013 Mar 7;117(9):2695-704. doi: 10.1021/jp3093379. Epub 2013 Feb 25.
6
Looking at the Green Fluorescent Protein (GFP) chromophore from a different perspective: a computational insight.从不同角度看绿色荧光蛋白(GFP)发色团:计算视角。
Spectrochim Acta A Mol Biomol Spectrosc. 2013 Feb 15;103:295-303. doi: 10.1016/j.saa.2012.11.007. Epub 2012 Nov 16.
7
Fluorescence of a histidine-modified enhanced green fluorescent protein (EGFP) effectively quenched by copper(II) ions.组氨酸修饰的增强型绿色荧光蛋白(EGFP)的荧光被铜(II)离子有效猝灭。
J Fluoresc. 2013 Mar;23(2):273-81. doi: 10.1007/s10895-012-1145-y. Epub 2012 Nov 6.
8
Crystal structure of enhanced green fluorescent protein to 1.35 Å resolution reveals alternative conformations for Glu222.增强型绿色荧光蛋白晶体结构解析至 1.35Å 分辨率,揭示 Glu222 的两种构象。
PLoS One. 2012;7(10):e47132. doi: 10.1371/journal.pone.0047132. Epub 2012 Oct 16.
9
Microscopy: Bright light, better labels.显微镜检查:光线明亮,标记更佳。
Nature. 2011 Oct 5;478(7367):137-42. doi: 10.1038/478137a.
10
Determination of copper(II) ion concentration by lifetime measurements of green fluorescent protein.利用绿色荧光蛋白的寿命测量法测定铜(II)离子浓度。
J Fluoresc. 2011 Nov;21(6):2143-53. doi: 10.1007/s10895-011-0916-1. Epub 2011 Jul 20.