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使用市售基于荧光的多重PCR分型试剂盒探究灵长类动物之间的物种特异性。

Species specificities among primates probed with commercially available fluorescence-based multiplex PCR typing kits.

作者信息

Hiroshige Yuuji, Ohtaki Hiroyuki, Yoshimoto Takashi, Ogawa Hisae, Ishii Akira, Yamamoto Toshimichi

机构信息

Department of Legal Medicine and Bioethics, Graduate School of Medicine, Nagoya University, 65 Tsurumai-cho, Showa-ku, Nagoya 466-8550, Japan.

Department of Legal Medicine and Bioethics, Graduate School of Medicine, Nagoya University, 65 Tsurumai-cho, Showa-ku, Nagoya 466-8550, Japan.

出版信息

Leg Med (Tokyo). 2015 Sep;17(5):326-33. doi: 10.1016/j.legalmed.2015.03.006. Epub 2015 Apr 3.

Abstract

To assess species specificities among primates of signals from short tandem repeat (STR) loci included in two commercially available kits, mainly the AmpFlSTR Identifiler kit and additionally the GenePrint PowerPlex 16 system, we analyzed 69 DNA samples from 22 nonhuman primate species representing apes, Old World Monkeys (OWMs), New World Monkeys (NWMs), and prosimians. Each prosimian species and the NWM cotton-top tamarin apparently lacked all STR loci probed. Only one peak, the amelogenin-X peak, was evident in samples from all other NWMs, except the owl monkey. In contrast, several loci, including the amelogenin-X peak, was evident in samples from each OWM species. Notably, for each ape sample, the amelogenin peaks were concordant with morphological gender of the individual. Among the primates, especially in apes, the numbers of alleles for STR loci were increasing according to their phylogenetic order: prosimians<NWMs<OWNs<apes, and so among apes: agile gibbons<white handed gibbons<orangutans<gorillas/common chimpanzees/bonobos. The species specificities among primates for a few commercially released multiplex STR kits examined in this study would contribute to forensic examinations.

摘要

为评估两种市售试剂盒(主要是AmpFlSTR Identifiler试剂盒,另外还有GenePrint PowerPlex 16系统)中所含短串联重复序列(STR)位点信号在灵长类动物中的物种特异性,我们分析了来自22种非人类灵长类动物的69份DNA样本,这些动物代表了猿类、旧世界猴(OWMs)、新世界猴(NWMs)和原猴亚目动物。每个原猴亚目物种以及新世界猴棉顶狨显然缺乏所有检测的STR位点。除夜猴外,在所有其他新世界猴的样本中,只有一个峰,即牙釉蛋白-X峰是明显的。相比之下,在每个旧世界猴物种的样本中,包括牙釉蛋白-X峰在内的几个位点是明显的。值得注意的是,对于每个猿类样本,牙釉蛋白峰与个体的形态学性别一致。在灵长类动物中,尤其是在猿类中,STR位点的等位基因数量按照它们的系统发育顺序增加:原猴亚目动物<新世界猴<旧世界猴<猿类,在猿类中也是如此:白眉长臂猿<白掌长臂猿<猩猩<大猩猩/普通黑猩猩/倭黑猩猩。本研究中检测的几种市售多重STR试剂盒在灵长类动物中的物种特异性将有助于法医检验。

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