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聚乙二醇化抗高血压药物氨氯地平、阿替洛尔和赖诺普利与脂质双分子层膜的相互作用:分子动力学模拟研究。

Interaction of PEGylated anti-hypertensive drugs, amlodipine, atenolol and lisinopril with lipid bilayer membrane: A molecular dynamics simulation study.

作者信息

Yousefpour Abbas, Modarress Hamid, Goharpey Fatemeh, Amjad-Iranagh Sepideh

机构信息

Department of Nanotechnology, Amirkabir University of Technology (Tehran Polytechnic), Tehran, Iran.

Department of Chemical Engineering, Amirkabir University of Technology (Tehran Polytechnic), Tehran, Iran.

出版信息

Biochim Biophys Acta. 2015 Aug;1848(8):1687-98. doi: 10.1016/j.bbamem.2015.04.016. Epub 2015 May 8.

Abstract

The interaction of PEGylated anti-hypertensive drugs, amlodipine, atenolol and lisinopril with lipid bilayer membrane dimyristoylphosphatidylcholine (DMPC) has been studied in nine different simulation systems consisting of 128 lipid molecules and appropriate number of water molecules by molecular dynamics method and by utilizing GROMACS software. The influences of PEGylation on the mentioned drugs and the differences in application of two types of spacer molecules on the performance of drugs and DMPC membrane have been evaluated and mass density of the components in the simulation box, mean square displacement (MSD), electrostatic potential, hydrogen bonding, radial distribution function (RDF), area per lipid, order parameter, and angle distribution of the component molecules including drug, DMPC and PEG has been investigated. Furthermore, umbrella sampling analysis indicated that, PEGylation of the drugs made amlodipine to behave more hydrophilic, whereas in case of lisinopril and atenolol, PEGylation made these drugs to behave more hydrophobic. In almost all of the simulated systems, PEGylation increased the diffusion coefficient of the drugs.

摘要

通过分子动力学方法并利用GROMACS软件,在由128个脂质分子和适量水分子组成的九个不同模拟系统中,研究了聚乙二醇化抗高血压药物氨氯地平、阿替洛尔和赖诺普利与脂质双分子层膜二肉豆蔻酰磷脂酰胆碱(DMPC)的相互作用。评估了聚乙二醇化对上述药物的影响以及两种类型的间隔分子在药物性能和DMPC膜应用方面的差异,并研究了模拟盒中各组分的质量密度、均方位移(MSD)、静电势、氢键、径向分布函数(RDF)、每个脂质的面积、序参数以及包括药物、DMPC和聚乙二醇在内的组分分子的角度分布。此外,伞形采样分析表明,药物的聚乙二醇化使氨氯地平表现出更强的亲水性,而对于赖诺普利和阿替洛尔,聚乙二醇化使这些药物表现出更强的疏水性。在几乎所有模拟系统中,聚乙二醇化增加了药物的扩散系数。

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