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中国中部六盘山地区狭域分布的特有种六盘山齿突蟾的遗传多样性与历史种群动态

Genetic diversity and historical demography of the narrow-range endemic Alpine toad, Scutiger liupanensis, in the Liupan Mountains of central China.

作者信息

Su L-N, Meng H-Z, Li X-C

机构信息

College of Life Sciences of Shaanxi Normal University, Xi'an, China.

College of Life Sciences of Shaanxi Normal University, Xi'an, China

出版信息

Genet Mol Res. 2015 May 11;14(2):4865-78. doi: 10.4238/2015.May.11.19.

Abstract

The genetic diversity and historical demography of the narrow-range endemic Alpine toad, Scutiger liupanensis, in the Liupanshan National Forest Park of central China were estimated using cytochrome b and cytochrome c oxidase subunit I (COI) from 85 individuals from five local populations. Both the haplotype diversity (Hd) and the nucleotide diversity (Pi) were very high. Phylogenetic analysis of the 63 haplotypes revealed two major clades, and an analysis of molecular variance attributed most of the variation to within populations. Mantel tests did not reveal an isolation by distance pattern of genetic divergence between populations, and SAMOVA showed no phylogeographic structure. The results of neutrality tests, mismatch distribution analyses, and allelic frequency spectra suggest that a sudden demographic expansion occurred, and that high genetic variation is beneficial to the survival and development of this species.

摘要

利用来自中国中部六盘山国家森林公园五个当地种群的85个个体的细胞色素b和细胞色素c氧化酶亚基I(COI),对狭域特有种六盘山齿突蟾的遗传多样性和历史种群动态进行了估计。单倍型多样性(Hd)和核苷酸多样性(Pi)都非常高。对63个单倍型的系统发育分析揭示了两个主要分支,分子方差分析将大部分变异归因于种群内部。Mantel检验未揭示种群间遗传分化的距离隔离模式,SAMOVA也未显示系统地理结构。中性检验、错配分布分析和等位基因频率谱的结果表明,该物种发生了突然的种群扩张,并且高遗传变异有利于该物种的生存和发展。

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