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平壤日升放线菌新属新种,嗜温放线菌科的一个成员,从一份农业土壤样本中分离得到。

Risungbinella pyongyangensis gen. nov., sp. nov., a mesophilic member of the family Thermoactinomycetaceae isolated from an agricultural soil sample.

作者信息

Kim MyongChol, Kim TongRyul, Ri SongYong, Jiang Fan, Chang Xulu, Liu Ying, Ren Lvzhi, Qiu Xia, Deng Sangsang, Fang Chengxiang, Zheng Congyi, Peng Fang

机构信息

China Center for Type Culture Collection (CCTCC), College of Life Sciences, Wuhan University, Wuhan 430072, PR China.

College of Life Sciences, Kim Il Sung University, Pyongyang, Democratic People's Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2015 Aug;65(8):2726-2733. doi: 10.1099/ijs.0.000328. Epub 2015 May 14.

DOI:10.1099/ijs.0.000328
PMID:25977282
Abstract

A mesophilic strain, designed MC 210T, was isolated from an agricultural soil sample from Pyongyang, Democratic People's Republic of Korea, and its taxonomic position was investigated by using a polyphasic approach. The novel strain grew well on PYI medium, and no diffusible pigments were produced. The optimum temperature for growth was 37 °C. The aerial mycelium was well developed, but not fragmented. The strain was Gram-reaction-positive and non-motile and formed endospores on the aerial mycelium. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain MC 210T belongs to the family Thermoactinomycetaceae. Strain MC 210T showed 16S rRNA gene sequence similarities of 92.90 and 92.54% to the type strains of Geothermomicrobium terrae and Shimazuella kribbensis, respectively. The cell wall of strain MC 210T contained meso-diaminopimelic acid, glutamic acid and alanine as the diagnostic amino acids, and whole-cell hydrolysates contained glucose, arabinose and galactose. Strain MC 210T contained anteiso-C13 : 0, iso-C14 : 0, C14 : 0, anteiso-C15 : 0, C16 : 0 and iso-C13 : 0 as the major cellular fatty acids. The main polar lipids were phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, two unknown aminophospholipids, an unknown aminolipid, three unknown phospholipids and five unknown polar lipids. The predominant menaquinone was MK-7.The G+C content of the genomic DNA was 42.1 mol%. On the basis of our phylogenetic, physiological and chemotaxonomic data, strain MC 210T is considered to represent a novel genus and species, for which we propose the name Risungbinella pyongyangensis gen. nov., sp. nov., in the family Thermoactinomycetaceae. The type strain of Risungbinella pyongyangensis is MC 210T (CCTCC AA 2013021T = NRRL B-59118T).

摘要

从朝鲜民主主义人民共和国平壤市的一份农业土壤样本中分离出了一株嗜温菌株,命名为MC 210T,并采用多相分类法对其分类地位进行了研究。该新菌株在PYI培养基上生长良好,不产生可扩散色素。生长的最适温度为37°C。气生菌丝发育良好,但不形成片段。该菌株革兰氏反应阳性,无运动性,在气生菌丝上形成内生孢子。基于16S rRNA基因序列的系统发育分析表明,菌株MC 210T属于嗜热放线菌科。菌株MC 210T与地热微菌属的模式菌株和Kribbensis嗜热放线菌的模式菌株的16S rRNA基因序列相似性分别为92.90%和92.54%。菌株MC 210T的细胞壁含有内消旋二氨基庚二酸、谷氨酸和丙氨酸作为特征性氨基酸,全细胞水解产物含有葡萄糖、阿拉伯糖和半乳糖。菌株MC 210T含有anteiso-C13 : 0、iso-C14 : 0、C14 : 0、anteiso-C15 : 0、C16 : 0和iso-C13 : 0作为主要细胞脂肪酸。主要极性脂为磷脂酰乙醇胺、磷脂酰甲基乙醇胺、磷脂酰甘油、二磷脂酰甘油、两种未知氨基磷脂、一种未知氨基脂、三种未知磷脂和五种未知极性脂。主要甲基萘醌为MK-7。基因组DNA的G+C含量为42.1 mol%。根据我们的系统发育、生理和化学分类数据,菌株MC 210T被认为代表一个新的属和种,我们将其命名为平壤立圣菌属(Risungbinella pyongyangensis),新属,新种,属于嗜热放线菌科。平壤立圣菌的模式菌株为MC 210T(中国典型培养物保藏中心AA 2013021T = 美国国家菌种保藏中心B-59118T)。

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