• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人碳酸酐酶II中铜(II)结合位点的表征

Characterization of the Copper(II) Binding Sites in Human Carbonic Anhydrase II.

作者信息

Nettles Whitnee L, Song He, Farquhar Erik R, Fitzkee Nicholas C, Emerson Joseph P

机构信息

†Department of Chemistry, Mississippi State University, Box 9573, Mississippi State, Mississippi 39762-9573, United States.

‡National Synchrotron Light Source, Brookhaven National Laboratory, Case Western Reserve University Center for Synchrotron Biosciences, Upton, New York 11973, United States.

出版信息

Inorg Chem. 2015 Jun 15;54(12):5671-80. doi: 10.1021/acs.inorgchem.5b00057. Epub 2015 May 26.

DOI:10.1021/acs.inorgchem.5b00057
PMID:26010488
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4482258/
Abstract

Human carbonic anhydrase (CA) is a well-studied, robust, mononuclear Zn-containing metalloprotein that serves as an excellent biological ligand system to study the thermodynamics associated with metal ion coordination chemistry in aqueous solution. The apo form of human carbonic anhydrase II (CA) binds 2 equiv of copper(II) with high affinity. The Cu(2+) ions bind independently forming two noncoupled type II copper centers in CA (CuA and CuB). However, the location and coordination mode of the CuA site in solution is unclear, compared to the CuB site that has been well-characterized. Using paramagnetic NMR techniques and X-ray absorption spectroscopy we identified an N-terminal Cu(2+) binding location and collected information on the coordination mode of the CuA site in CA, which is consistent with a four- to five-coordinate N-terminal Cu(2+) binding site reminiscent to a number of N-terminal copper(II) binding sites including the copper(II)-amino terminal Cu(2+) and Ni(2+) and copper(II)-β-amyloid complexes. Additionally, we report a more detailed analysis of the thermodynamics associated with copper(II) binding to CA. Although we are still unable to fully deconvolute Cu(2+) binding data to the high-affinity CuA site, we derived pH- and buffer-independent values for the thermodynamics parameters K and ΔH associated with Cu(2+) binding to the CuB site of CA to be 2 × 10(9) and -17.4 kcal/mol, respectively.

摘要

人类碳酸酐酶(CA)是一种经过充分研究的、稳定的含单核锌金属蛋白,它是研究水溶液中与金属离子配位化学相关的热力学的优秀生物配体系统。人碳酸酐酶II(CA)的脱辅基形式以高亲和力结合2当量的铜(II)。Cu(2+)离子独立结合,在CA中形成两个非耦合的II型铜中心(CuA和CuB)。然而,与已得到充分表征的CuB位点相比,溶液中CuA位点的位置和配位模式尚不清楚。利用顺磁核磁共振技术和X射线吸收光谱,我们确定了一个N端Cu(2+)结合位置,并收集了关于CA中CuA位点配位模式的信息,这与一个四到五配位的N端Cu(2+)结合位点一致,类似于许多N端铜(II)结合位点,包括铜(II)-氨基末端Cu(2+)和Ni(2+)以及铜(II)-β-淀粉样蛋白复合物。此外,我们报告了对与铜(II)结合到CA相关的热力学的更详细分析。尽管我们仍然无法完全解卷积Cu(2+)与高亲和力CuA位点的结合数据,但我们得出了与Cu(2+)结合到CA的CuB位点相关的热力学参数K和ΔH的与pH和缓冲液无关的值,分别为2×10(9)和-17.4 kcal/mol。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/fac57ec7a787/nihms700966f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/77b2b52e370b/nihms700966f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/1d2cb268ce74/nihms700966f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/59209bb9e95d/nihms700966f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/d23dfe007edb/nihms700966f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/934693e4546a/nihms700966f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/2a71381a3d33/nihms700966f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/fac57ec7a787/nihms700966f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/77b2b52e370b/nihms700966f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/1d2cb268ce74/nihms700966f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/59209bb9e95d/nihms700966f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/d23dfe007edb/nihms700966f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/934693e4546a/nihms700966f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/2a71381a3d33/nihms700966f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43d9/4482258/fac57ec7a787/nihms700966f7.jpg

相似文献

1
Characterization of the Copper(II) Binding Sites in Human Carbonic Anhydrase II.人碳酸酐酶II中铜(II)结合位点的表征
Inorg Chem. 2015 Jun 15;54(12):5671-80. doi: 10.1021/acs.inorgchem.5b00057. Epub 2015 May 26.
2
Building reactive copper centers in human carbonic anhydrase II.在人碳酸酐酶 II 中构建反应性铜中心。
J Biol Inorg Chem. 2013 Aug;18(6):595-8. doi: 10.1007/s00775-013-1009-1. Epub 2013 Jun 7.
3
Revisiting zinc coordination in human carbonic anhydrase II.重新探讨人碳酸酐酶 II 的锌配位情况。
Inorg Chem. 2012 Oct 15;51(20):11098-105. doi: 10.1021/ic301645j. Epub 2012 Oct 3.
4
Metal Ion Binding Induces Local Protein Unfolding and Destabilizes Human Carbonic Anhydrase II.金属离子结合诱导局部蛋白质展开并使人类碳酸酐酶 II 失稳。
Inorg Chem. 2022 Jan 24;61(3):1249-1253. doi: 10.1021/acs.inorgchem.1c03271. Epub 2022 Jan 6.
5
Structurally distinct active sites in the copper(II)-substituted aminopeptidases from Aeromonas proteolytica and Escherichia coli.来自解蛋白气单胞菌和大肠杆菌的铜(II)取代氨肽酶中结构不同的活性位点。
J Am Chem Soc. 2002 Nov 6;124(44):13025-34. doi: 10.1021/ja026341p.
6
Elucidating the role of metal ions in carbonic anhydrase catalysis.阐明金属离子在碳酸酐酶催化中的作用。
Nat Commun. 2020 Sep 11;11(1):4557. doi: 10.1038/s41467-020-18425-5.
7
Thermodynamics of metal ion binding. 1. Metal ion binding by wild-type carbonic anhydrase.金属离子结合的热力学。1. 野生型碳酸酐酶对金属离子的结合
Biochemistry. 2001 May 8;40(18):5338-44. doi: 10.1021/bi001731e.
8
Metal binding affinities of Arabidopsis zinc and copper transporters: selectivities match the relative, but not the absolute, affinities of their amino-terminal domains.拟南芥锌和铜转运蛋白的金属结合亲和力:选择性与其氨基末端结构域的相对亲和力相匹配,而不是绝对亲和力。
Biochemistry. 2009 Dec 15;48(49):11640-54. doi: 10.1021/bi901573b.
9
Thermodynamic parameters for the association of fluorinated benzenesulfonamides with bovine carbonic anhydrase II.氟化苯磺酰胺与牛碳酸酐酶II结合的热力学参数。
Chem Asian J. 2007 Jan 8;2(1):94-105. doi: 10.1002/asia.200600360.
10
Using N-Terminal Coordination of Cu(II) and Ni(II) to Isolate the Coordination Environment of Cu(I) and Cu(II) Bound to His13 and His14 in Amyloid-β(4-16).使用 N-末端的 Cu(II) 和 Ni(II) 配位来分离与淀粉样蛋白-β(4-16)中 His13 和 His14 配位的 Cu(I) 和 Cu(II) 的配位环境。
Inorg Chem. 2019 Nov 18;58(22):15138-15154. doi: 10.1021/acs.inorgchem.9b01940. Epub 2019 Oct 28.

引用本文的文献

1
Energetics and dynamics of the proton shuttle of carbonic anhydrase II.碳酸酐酶 II 的质子穿梭的能量学和动力学。
Cell Mol Life Sci. 2023 Sep 9;80(10):286. doi: 10.1007/s00018-023-04936-z.
2
Synthesis, characterization and biological evaluation of pyrazole-based benzene sulfonamides as inhibitors of human carbonic anhydrase II, IX and XII.基于吡唑的苯磺酰胺类化合物作为人碳酸酐酶II、IX和XII抑制剂的合成、表征及生物学评价
RSC Adv. 2023 Jun 20;13(27):18461-18479. doi: 10.1039/d3ra03276k. eCollection 2023 Jun 15.
3
Metal Ion Binding Induces Local Protein Unfolding and Destabilizes Human Carbonic Anhydrase II.

本文引用的文献

1
Calorimetric investigation of copper binding in the N-terminal region of the prion protein at low copper loading: evidence for an entropically favorable first binding event.低铜负载下朊病毒蛋白N端区域铜结合的量热法研究:首次结合事件熵有利的证据
Inorg Chem. 2015 Jan 20;54(2):441-7. doi: 10.1021/ic502014x. Epub 2014 Dec 26.
2
Revised coordination model and stability constants of Cu(II) complexes of tris buffer.三羟甲基氨基甲烷缓冲液中 Cu(II)配合物的修订协调模型和稳定常数。
Inorg Chem. 2013 Dec 16;52(24):13927-33. doi: 10.1021/ic401451s. Epub 2013 Dec 4.
3
Cu(II) complex formation by ACES buffer.
金属离子结合诱导局部蛋白质展开并使人类碳酸酐酶 II 失稳。
Inorg Chem. 2022 Jan 24;61(3):1249-1253. doi: 10.1021/acs.inorgchem.1c03271. Epub 2022 Jan 6.
4
Reconsidering anion inhibitors in the general context of drug design studies of modulators of activity of the classical enzyme carbonic anhydrase.重新考虑阴离子抑制剂在活性调节剂的经典酶碳酸酐酶的药物设计研究的一般背景下。
J Enzyme Inhib Med Chem. 2021 Dec;36(1):561-580. doi: 10.1080/14756366.2021.1882453.
5
Stress-Related Changes in the Expression and Activity of Plant Carbonic Anhydrases.植物碳酸酐酶表达与活性的应激相关变化
Planta. 2021 Feb 3;253(2):58. doi: 10.1007/s00425-020-03553-5.
6
Structure and mechanism of copper-carbonic anhydrase II: a nitrite reductase.铜-碳酸酐酶II的结构与机制:一种亚硝酸还原酶。
IUCrJ. 2020 Feb 21;7(Pt 2):287-293. doi: 10.1107/S2052252520000986. eCollection 2020 Mar 1.
7
Carbonic anhydrase modification for carbon management.碳酸酐酶修饰在碳管理中的应用。
Environ Sci Pollut Res Int. 2020 Jan;27(2):1294-1318. doi: 10.1007/s11356-019-06667-w. Epub 2019 Dec 3.
8
Pull-Down of Metalloproteins in Their Native States by Using Desthiobiotin-Based Probes.利用基于去硫生物素的探针在天然状态下拉取金属蛋白。
Chembiochem. 2019 Apr 15;20(8):1003-1007. doi: 10.1002/cbic.201800613. Epub 2019 Feb 25.
9
Study of Iron, Zinc and Copper Binding Proteins of pv. : Emphasis on Secreted Metalloproteins.恶性疟原虫铁、锌和铜结合蛋白的研究:着重于分泌型金属蛋白
Front Microbiol. 2018 Aug 21;9:1838. doi: 10.3389/fmicb.2018.01838. eCollection 2018.
10
Dioxygen, an unexpected carbonic anhydrase ligand.氧气,一种意想不到的碳酸酐酶配体。
J Enzyme Inhib Med Chem. 2018 Dec;33(1):999-1005. doi: 10.1080/14756366.2018.1475371.
ACES 缓冲液与 Cu(II) 配合物的形成。
J Inorg Biochem. 2013 Dec;129:58-61. doi: 10.1016/j.jinorgbio.2013.08.012. Epub 2013 Sep 6.
4
Building reactive copper centers in human carbonic anhydrase II.在人碳酸酐酶 II 中构建反应性铜中心。
J Biol Inorg Chem. 2013 Aug;18(6):595-8. doi: 10.1007/s00775-013-1009-1. Epub 2013 Jun 7.
5
Modeling complex equilibria in isothermal titration calorimetry experiments: thermodynamic parameters estimation for a three-binding-site model.对非等温滴定量热实验中的复杂平衡进行建模:三结合位点模型热力学参数的估计。
Anal Biochem. 2013 Mar 15;434(2):233-41. doi: 10.1016/j.ab.2012.11.030. Epub 2012 Dec 19.
6
Revisiting zinc coordination in human carbonic anhydrase II.重新探讨人碳酸酐酶 II 的锌配位情况。
Inorg Chem. 2012 Oct 15;51(20):11098-105. doi: 10.1021/ic301645j. Epub 2012 Oct 3.
7
Mass spectral studies reveal the structure of Aβ1-16-Cu2+ complex resembling ATCUN motif.质谱研究揭示了 Aβ1-16-Cu2+ 复合物的结构类似于 ATCUN 基序。
Inorg Chem. 2012 Aug 6;51(15):7960-2. doi: 10.1021/ic301244x. Epub 2012 Jul 17.
8
Calorimetric investigation of copper(II) binding to Aβ peptides: thermodynamics of coordination plasticity.量热法研究铜(II)与 Aβ 肽的结合:配位可塑性的热力学。
J Biol Inorg Chem. 2012 Apr;17(4):531-41. doi: 10.1007/s00775-012-0874-3. Epub 2012 Jan 22.
9
Transient, sparsely populated compact states of apo and calcium-loaded calmodulin probed by paramagnetic relaxation enhancement: interplay of conformational selection and induced fit.瞬态、稀疏分布的去辅基 apo 和钙调蛋白的紧密态通过顺磁弛豫增强来探测:构象选择和诱导契合的相互作用。
J Am Chem Soc. 2011 Nov 23;133(46):18966-74. doi: 10.1021/ja2082813. Epub 2011 Oct 31.
10
Thermodynamic study of Cu2+ binding to the DAHK and GHK peptides by isothermal titration calorimetry (ITC) with the weaker competitor glycine.采用等温滴定量热法(ITC),以较弱的竞争物甘氨酸为研究对象,研究了 Cu2+与 DAHK 和 GHK 肽的结合热力学。
J Biol Inorg Chem. 2012 Jan;17(1):37-47. doi: 10.1007/s00775-011-0824-5. Epub 2011 Sep 4.