Kawahara Kazuki, Oki Hiroya, Fukakusa Shunsuke, Maruno Takahiro, Kobayashi Yuji, Motooka Daisuke, Taniguchi Tooru, Honda Takeshi, Iida Tetsuya, Nakamura Shota, Ohkubo Tadayasu
Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, Osaka 565-0871, Japan.
Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.
Acta Crystallogr F Struct Biol Commun. 2015 Jun;71(Pt 6):663-7. doi: 10.1107/S2053230X15005890. Epub 2015 May 20.
Colonization factor antigen III (CFA/III) is one of the virulence factors of human enterotoxigenic Escherichia coli (ETEC) that forms the long, thin, proteinaceous fibres of type IV pili through assembly of its major and minor subunits CofA and CofB, respectively. The crystal structure of CofA has recently been reported; however, the lack of structural information for CofB, the largest among the known type IV pilin subunits, hampers a comprehensive understanding of CFA/III pili. In this study, constructs of wild-type CofB with an N-terminal truncation and the corresponding SeMet derivative were cloned, expressed, purified and crystallized. The crystals belonged to the rhombohedral space group R32, with unit-cell parameters a = b = 103.97, c = 364.57 Å for the wild-type construct and a = b = 103.47, c = 362.08 Å for the SeMet-derivatized form. Although the diffraction quality of these crystals was initially very poor, dehydration of the crystals substantially improved the resolution limit from ∼ 4.0 to ∼ 2.0 Å. The initial phase was solved by the single-wavelength anomalous dispersion (SAD) method using a dehydrated SeMet CofB crystal, which resulted in an interpretable electron-density map.
定居因子抗原III(CFA/III)是人类产肠毒素大肠杆菌(ETEC)的毒力因子之一,它通过分别组装其主要和次要亚基CofA和CofB形成IV型菌毛的长而细的蛋白质纤维。最近报道了CofA的晶体结构;然而,已知的IV型菌毛蛋白亚基中最大的CofB缺乏结构信息,这妨碍了对CFA/III菌毛的全面理解。在本研究中,克隆、表达、纯化并结晶了具有N端截短的野生型CofB构建体及其相应的硒代甲硫氨酸衍生物。晶体属于菱面体空间群R32,野生型构建体的晶胞参数为a = b = 103.97,c = 364.57 Å,硒代甲硫氨酸衍生形式的晶胞参数为a = b = 103.47,c = 362.08 Å。尽管这些晶体的衍射质量最初很差,但晶体脱水使分辨率极限从约4.0 Å大幅提高到约2.0 Å。使用脱水的硒代甲硫氨酸CofB晶体通过单波长反常色散(SAD)方法解析了初始相位,得到了可解释的电子密度图。