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个体中恶性疟原虫疟疾的分类复杂性与ADORA2A和GRK5基因的遗传变异有关。

Categorical complexities of Plasmodium falciparum malaria in individuals is associated with genetic variations in ADORA2A and GRK5 genes.

作者信息

Gupta Himanshu, Jain Aditya, Saadi Abdul Vahab, Vasudevan Thanvanthri G, Hande Manjunath H, D'Souza Sydney C, Ghosh Susanta K, Umakanth Shashikiran, Satyamoorthy Kapaettu

机构信息

Department of Biotechnology, School of Life Sciences, Manipal University, Manipal, Karnataka, India.

Department of Medicine, Kasturba Medical College, Manipal, Manipal University, Karnataka, India.

出版信息

Infect Genet Evol. 2015 Aug;34:188-99. doi: 10.1016/j.meegid.2015.06.010. Epub 2015 Jun 9.

Abstract

In the erythrocytes, malaria parasite entry and infection is mediated through complex membrane sorting and signaling processes. We investigated the effects of single-locus and multilocus interactions to test the hypothesis that the members of the GPCR family genes, adenosine A2a receptor (ADORA2A) and G-protein coupled receptor kinase5 (GRK5), may contribute to the pathogenesis of malaria caused by Plasmodium falciparum (Pf) independently or through complex interactions. In a case-control study of adults, individuals affected by Pf malaria (complicated n=168; uncomplicated n=282) and healthy controls (n=450) were tested for their association to four known SNPs in GRK5 (rs2230345, rs2275036, rs4752307 and rs11198918) and two in ADORA2A (rs9624472 and rs5751876) genes with malaria susceptibility, using techniques of polymerase chain reaction-restriction fragment length polymorphisms and direct DNA sequencing. Single-locus analysis showed significant association of 2 SNPs; rs5751876 (OR=3.2(2.0-5.2); p=0.0006) of ADORA2A and rs2230345 (OR=0.3(0.2-0.5); p=0.0006) of GRK5 with malaria. The mean of the serum creatinine levels were significantly higher in patients with variant GG (p=0.006) of rs9624472 in ADORA2A gene compared to AA and AG genotypes in complicated Pf malaria cases, with the G allele also showing increased risk for malaria (OR=1.3(1.1-1.6); p=0.017). Analyses of predicted haplotypes of the two ADORA2A and the four GRK5 SNPs have identified the haplotypes that conferred risk as well as resistance to malaria with statistical significance. Molecular docking analysis of evolutionary rs2230345 SNP indicated a stable activity of GRK5 for the mutant allele compared to the wild type. Further, generalized multifactor dimensionality reduction to test the contribution of individual effects of the six polymorphisms and higher-order interactions to risk of symptoms/clinical complications of malaria suggested a best six-locus model showing statistical significance. The study provides evidence for the role of ADORA2A and GRK5 that might influence the etiology of malaria infection.

摘要

在红细胞中,疟原虫的侵入和感染是通过复杂的膜分选和信号传导过程介导的。我们研究了单基因座和多基因座相互作用的影响,以检验以下假设:G蛋白偶联受体(GPCR)家族基因的成员,即腺苷A2a受体(ADORA2A)和G蛋白偶联受体激酶5(GRK5),可能独立地或通过复杂的相互作用促成恶性疟原虫(Pf)引起的疟疾发病机制。在一项针对成年人的病例对照研究中,使用聚合酶链反应-限制性片段长度多态性技术和直接DNA测序,对受Pf疟疾影响的个体(复杂病例n = 168;非复杂病例n = 282)和健康对照(n = 450)进行检测,以确定他们与GRK5基因中的四个已知单核苷酸多态性(SNP,rs2230345、rs2275036、rs4752307和rs11198918)以及ADORA2A基因中的两个SNP(rs9624472和rs5751876)与疟疾易感性的关联。单基因座分析显示2个SNP存在显著关联;ADORA2A的rs5751876(比值比[OR]=3.2(2.0 - 5.2);p = 0.0006)和GRK5的rs2230345(OR = 0.3(0.2 - 0.5);p = 0.0006)与疟疾相关。在复杂的Pf疟疾病例中,与AA和AG基因型相比,ADORA2A基因rs9624472的GG变异型患者的血清肌酐水平平均值显著更高(p = 0.006),G等位基因也显示出疟疾风险增加(OR = 1.3(1.1 - 1.6);p = 0.017)。对两个ADORA2A和四个GRK5 SNP的预测单倍型分析确定了具有统计学意义的赋予疟疾风险和抗性的单倍型。进化rs2230345 SNP的分子对接分析表明,与野生型相比,突变等位基因的GRK5具有稳定的活性。此外,采用广义多因素降维分析来检验这六个多态性的个体效应及其高阶相互作用对疟疾症状/临床并发症风险的贡献,结果显示一个具有统计学意义的最佳六基因座模型。该研究为ADORA2A和GRK5可能影响疟疾感染病因学的作用提供了证据。

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