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人参田土壤中分离出的一种促进植物生长的细菌——泛栖鞘氨醇单胞菌新种。

Sphingomonas panaciterrae sp. nov., a plant growth-promoting bacterium isolated from soil of a ginseng field.

作者信息

Sukweenadhi Johan, Kim Yeon-Ju, Kang Chang Ho, Farh Mohamed El-Agamy, Nguyen Ngoc-Lan, Hoang Van-An, Choi Eul-Su, Yang Deok-Chun

机构信息

Graduate School of Biotechnology and Ginseng Bank, College of Life Science, Kyung Hee University, Yongin, 446-701, Korea.

出版信息

Arch Microbiol. 2015 Oct;197(8):973-81. doi: 10.1007/s00203-015-1134-z. Epub 2015 Jul 11.

Abstract

Strain DCY91(T), a Gram-stain-negative, rod-shaped, aerobic, non-motile bacterium, was isolated from soil of ginseng field in Gyeonggi province, South Korea. Strain DCY91(T) shared the highest 16S rRNA gene sequence similarity with Sphingomonas mucosissima DSM 17494(T) (98.55%), Sphingomonas dokdonensis KACC 17420(T) (98.11%) and Sphingomonas xinjiangensis DSM 26736(T) (96.68%). The strain DCY91(T) was found to able to grow best in trypticase soy agar at 28 °C, at pH 7 and at 0.5 % NaCl. Ubiquinone 10 was identified as the isoprenoid quinone. The major polar lipids were identified as sphingoglycolipid, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylcholine. The major fatty acids of strain DCY91(T) were identified as unsaturated C18:1 ω7c and saturated C16:0. The major polyamine content was sym-homospermidine. The DNA G + C content was determined to be 65.8 mol% (HPLC). After 6 days of incubation, strain DCY91(T) produced 9.64 ± 1.73 and 33.73 ± 4.66 µg/ml indole-3-acetic acid, using media without L-tryptophan and supplemented with L-tryptophan, respectively. Strain DCY91(T) was also weakly solubilized phosphate and produced siderophores. On the basis of the phenotypic characteristics, genotypic analysis and chemotaxonomic characteristics, strain DCY91(T) is considered to represent a novel species of the genus Sphingomonas, for which the name Sphingomonas panaciterrae sp. nov. is proposed. The type strain is DCY91(T) (=KCTC 42346(T) =JCM 30807(T)).

摘要

菌株DCY91(T)是一种革兰氏阴性、杆状、需氧、不运动的细菌,从韩国京畿道人参田土壤中分离得到。菌株DCY91(T)与黏液鞘氨醇单胞菌DSM 17494(T)(98.55%)、独岛鞘氨醇单胞菌KACC 17420(T)(98.11%)和新疆鞘氨醇单胞菌DSM 26736(T)(96.68%)的16S rRNA基因序列相似度最高。发现菌株DCY91(T)在胰蛋白胨大豆琼脂上,于28℃、pH 7和0.5% NaCl条件下生长最佳。泛醌10被鉴定为类异戊二烯醌。主要极性脂类被鉴定为鞘糖脂、双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油和磷脂酰胆碱。菌株DCY91(T)的主要脂肪酸被鉴定为不饱和C18:1 ω7c和饱和C16:0。主要多胺成分是对称高亚精胺。经高效液相色谱法测定,DNA G + C含量为65.8 mol%。培养6天后,菌株DCY91(T)分别在不添加L-色氨酸和添加L-色氨酸的培养基中产生9.64±1.73和33.73±4.66 μg/ml的吲哚-3-乙酸。菌株DCY91(T)还能微弱地溶解磷酸盐并产生铁载体。基于表型特征、基因型分析和化学分类特征,菌株DCY91(T)被认为代表鞘氨醇单胞菌属的一个新物种,为此提出新名称人参田鞘氨醇单胞菌(Sphingomonas panaciterrae sp. nov.)。模式菌株为DCY91(T)(=KCTC 42346(T) =JCM 30807(T))。

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