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挪威西部深槽峡湾中细菌多样性的上下控制。

Top-down and bottom-up control on bacterial diversity in a western Norwegian deep-silled fjord.

机构信息

Department of Biology, University of Bergen, Thormøhlensgt 53A, N-5006, Bergen, Norway.

Uni Research AS, Uni Research Environment, Thormøhlensgt 49B, N-5006 Bergen, Norway.

出版信息

FEMS Microbiol Ecol. 2015 Jul;91(7). doi: 10.1093/femsec/fiv076. Epub 2015 Jul 12.

Abstract

We investigated the relationship between viruses and co-occurring bacterial communities in the Sognefjord, a deep-silled fjord in Western Norway. A combination of flow cytometry and automated ribosomal intergenic spacer analysis (ARISA) was used to assess prokaryote and viral abundances, and bacterial diversity and community composition, respectively, in depth profiles and at two different sampling seasons (November and May). With one exception, bacterial diversity did not vary between samples regardless of depth or season. The virus and prokaryote abundances as well as bacterial community composition, however, varied significantly with season and depth, suggesting a link between the Sognefjord viral community and potential bacterial host community diversity. To our knowledge, these findings provide the first description of microbial communities in the unique Sognefjord ecosystem, and in addition are in agreement with the simple model version of the 'Killing the Winner' theory (KtW), which postulates that microbial community diversity is a feature that is essentially top-down controlled by viruses, while community composition is bottom-up controlled by competition for limiting growth substrates.

摘要

我们研究了挪威西部深槽峡湾松恩峡湾中病毒与共存细菌群落之间的关系。我们结合使用流式细胞术和自动核糖体基因间隔区分析(ARISA),分别评估了深度剖面和两个不同采样季节(11 月和 5 月)中,原核生物和病毒丰度以及细菌多样性和群落组成。除了一个例外,无论深度或季节如何,细菌多样性在样本之间都没有差异。然而,病毒和原核生物丰度以及细菌群落组成却随季节和深度显著变化,这表明松恩峡湾病毒群落与潜在的细菌宿主群落多样性之间存在联系。据我们所知,这些发现首次描述了独特的松恩峡湾生态系统中的微生物群落,并且与“杀死胜利者”理论(KtW)的简单模型版本一致,该理论假设微生物群落多样性是一种主要由病毒自上而下控制的特征,而群落组成则是由竞争有限的生长基质来控制的。

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