Helling Britney A, Yang Ivana V
aDepartment of Medicine, University of Colorado School of Medicine bDepartment of Epidemiology, Colorado School of Public Health, Aurora cCenter for Genes, Environment and Health, National Jewish Health, Denver, Colorado, USA.
Curr Opin Pulm Med. 2015 Sep;21(5):454-62. doi: 10.1097/MCP.0000000000000191.
Idiopathic pulmonary fibrosis (IPF) is a fatal disease with limited treatment options and extensive gene expression changes identified in the lung parenchyma. Multiple lines of evidence suggest that epigenetic factors contribute to dysregulation of gene expression in IPF lung. Most importantly, risk factors that predispose to IPF - age, sex, cigarette smoke, and genetic variants - all influence epigenetic marks. This review summarizes recent findings of association of DNA methylation and histone modifications with the presence of disease and fibroproliferation.
In addition to targeted studies focused on specific gene loci, genome-wide profiles of DNA methylation demonstrate widespread DNA methylation changes in IPF lung tissue and a substantial effect of these methylation changes on gene expression. Genetic loci that have been recently associated with IPF also contain differentially methylated regions, suggesting that genetic and epigenetic factors act in concert to dysregulate gene expression in IPF lung.
Although we are in very early stages of understanding the role of epigenetics in IPF, the potential for the use of epigenetic marks as biomarkers and therapeutic targets is high and discoveries made in this field will likely bring us closer to better prognosticating and treating this fatal disease.
特发性肺纤维化(IPF)是一种致命疾病,治疗选择有限,且肺实质中存在广泛的基因表达变化。多项证据表明,表观遗传因素导致IPF肺中基因表达失调。最重要的是,易患IPF的危险因素——年龄、性别、吸烟和基因变异——均会影响表观遗传标记。本综述总结了DNA甲基化和组蛋白修饰与疾病存在及纤维增殖相关性的最新研究发现。
除了针对特定基因位点的研究外,DNA甲基化的全基因组图谱显示IPF肺组织中存在广泛的DNA甲基化变化,且这些甲基化变化对基因表达有显著影响。最近与IPF相关的基因位点也包含差异甲基化区域,这表明遗传和表观遗传因素共同作用导致IPF肺中基因表达失调。
尽管我们对表观遗传学在IPF中的作用仍处于非常早期的理解阶段,但将表观遗传标记用作生物标志物和治疗靶点的潜力很大,该领域的发现可能会使我们更接近对这种致命疾病进行更好的预后评估和治疗。