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色氨酸裂解酶(NosL):来自底物类似物和诱变的机制见解

Tryptophan Lyase (NosL): Mechanistic Insights from Substrate Analogues and Mutagenesis.

作者信息

Bhandari Dhananjay M, Xu Hui, Nicolet Yvain, Fontecilla-Camps Juan C, Begley Tadhg P

机构信息

‡Metalloproteins Unit, Institut de Biologie Structurale UMR5075, CEA, CNRS, Université Grenoble-Alpes 71, Avenue des Martyrs, CS 10090, 38044 Grenoble cedex 9, France.

出版信息

Biochemistry. 2015 Aug 11;54(31):4767-9. doi: 10.1021/acs.biochem.5b00764. Epub 2015 Jul 29.

Abstract

NosL is a member of a family of radical S-adenosylmethionine enzymes that catalyze the cleavage of the Cα-Cβ bond of aromatic amino acids. In this paper, we describe a set of experiments with substrate analogues and mutants for probing the early steps of the NosL mechanism. We provide biochemical evidence in support of the structural studies showing that the 5'-deoxyadenosyl radical abstracts a hydrogen atom from the amino group of tryptophan. We demonstrate that d-tryptophan is a substrate for NosL but shows relaxed regio control of the first β-scission reaction. Mutagenesis studies confirm that Arg323 is important for controlling the regiochemistry of the β-scission reaction and that Ser340 binds the substrate by hydrogen bonding to the indolic N1 atom.

摘要

NosL是一类自由基S-腺苷甲硫氨酸酶家族的成员,该家族催化芳香族氨基酸的Cα-Cβ键断裂。在本文中,我们描述了一系列使用底物类似物和突变体进行的实验,以探究NosL机制的早期步骤。我们提供了生化证据来支持结构研究,表明5'-脱氧腺苷自由基从色氨酸的氨基上夺取一个氢原子。我们证明d-色氨酸是NosL的底物,但在第一次β-断裂反应中显示出松弛的区域控制。诱变研究证实,Arg323对于控制β-断裂反应的区域化学很重要,并且Ser340通过与吲哚N1原子形成氢键来结合底物。

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