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蛋白质聚集过程中非必需寡聚体形成的模型。

A model for non-obligate oligomer formation in protein aggregration.

作者信息

Healy Eamonn F

机构信息

Department of Chemistry, St. Edward's University, Austin, TX 78704, USA.

出版信息

Biochem Biophys Res Commun. 2015 Sep 25;465(3):523-7. doi: 10.1016/j.bbrc.2015.08.052. Epub 2015 Aug 15.

Abstract

Using solvent-exposed intramolecular backbone hydrogen bonds as physico-chemical descriptors for protein packing, a role for transient, non-obligate oligomers in the formation of aberrant protein aggregates is presented. Oligomeric models of the both wild type (wt) and select mutant variants of superoxide dismutase (SOD1) are proposed to provide a structural basis for investigating the etiology of Amyotrophic Lateral Sclerosis (ALS).

摘要

利用溶剂暴露的分子内主链氢键作为蛋白质堆积的物理化学描述符,提出了瞬时、非必需寡聚体在异常蛋白质聚集体形成中的作用。提出了超氧化物歧化酶(SOD1)野生型(wt)和选定突变变体的寡聚体模型,为研究肌萎缩侧索硬化症(ALS)的病因提供结构基础。

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Acta Neuropathol Commun. 2014 May 14;2:55. doi: 10.1186/2051-5960-2-55.
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Intercellular propagated misfolding of wild-type Cu/Zn superoxide dismutase occurs via exosome-dependent and -independent mechanisms.
Proc Natl Acad Sci U S A. 2014 Mar 4;111(9):3620-5. doi: 10.1073/pnas.1312245111. Epub 2014 Feb 18.
4
A model for small heat shock protein inhibition of polyglutamine aggregation.
Cell Biochem Biophys. 2014 Jun;69(2):275-81. doi: 10.1007/s12013-013-9795-1.
5
Dimers, oligomers, everywhere.
Adv Exp Med Biol. 2012;747:1-18. doi: 10.1007/978-1-4614-3229-6_1.
6
SKEMPI: a Structural Kinetic and Energetic database of Mutant Protein Interactions and its use in empirical models.
Bioinformatics. 2012 Oct 15;28(20):2600-7. doi: 10.1093/bioinformatics/bts489. Epub 2012 Aug 1.
7
A model for heterooligomer formation in the heat shock response of Escherichia coli.
Biochem Biophys Res Commun. 2012 Apr 13;420(3):639-43. doi: 10.1016/j.bbrc.2012.03.054. Epub 2012 Mar 17.
8
A mechanism of action for small heat shock proteins.
Biochem Biophys Res Commun. 2012 Jan 6;417(1):268-73. doi: 10.1016/j.bbrc.2011.11.098. Epub 2011 Dec 1.
9
Superoxide dismutase 1 encoding mutations linked to ALS adopts a spectrum of misfolded states.
Mol Neurodegener. 2011 Nov 17;6:77. doi: 10.1186/1750-1326-6-77.
10
Intermolecular transmission of superoxide dismutase 1 misfolding in living cells.
Proc Natl Acad Sci U S A. 2011 Sep 27;108(39):16398-403. doi: 10.1073/pnas.1102645108. Epub 2011 Sep 19.

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